Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1247 |
Symbol | infB |
ID | 7383151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 1309644 |
End bp | 1312475 |
Gene Length | 2832 bp |
Protein Length | 943 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643654568 |
Product | translation initiation factor IF-2 |
Protein accession | YP_002552714 |
Protein GI | 222110450 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0182707 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAGTA ACACTGTTGC TGAGTTCGCT GCAGAGCTCA AGAAATCGCC TGAAACCTTG CTGGACCAGC TGAAGTCCGC CGGTGTGGTC AAGGCGTCGC CGTCGGACGT TCTAAACGAA GCCGACAAGC AAAAGCTGCT GGCCCACCTG CAGGCCAGTC ATGGCACTGC GGGGGGGGAC CGCAAAAAGA TCACCCTGGT CAAGAAGTCC ACCAGCGAGA TCAAGCAGGC CGACGCTTCT GGCAAGGCAC GCACGATCCA GGTCGAAGTG CGTAAGAAGC GTACTTTCAT CAAGCGTGAC GACAGTGTCG ACGCGCCTTC CGATGCGACT GAATCTGCTC CTTCGGCGGA GGATCTCGAG CTCGTGCGCC GCGAGGAAGA GGCGCGCCGT CAGGCAGAGC TGATTCGCCG CCAGGAGGAA GAGTTGGCCT TGACACGCCG CGAGCGTGAA GAGCGCGAGC GCCGCGAGCG CGAAGCCGAA GAACGCGCTG CCGCCTATGC CGCCCAGCAG GCGGAAAAGA AGGCGCAGGA GTCTGCGGAG CGTGCCGAGG CGCAGCGCGA AGCTGCCGTG GAGGCCGAAG AACGTGCGAA GGCACAGGCC GATGCCCGGG CAAAGGCCGA TGAAGAATCC AAGGCACGCG CGGCGGAAGA AACTGCACGT GCGGCCGACC TGGACGAGCG CCGCCGCAAG GCGCTTGCCG AGGCCGAGGC CATTCGCGCA ATGATGGCTG CCCCCAAGAA GGTGCTCGTG GCGAAGAAGC CCGAGGAACC CAAGCCTGCC GCCAAGGCGG GAGCTTCCGG GGATGCCAAG AAGGGTACGC TGCACAAACC CGCCACCGGT TCCGGCACGG GCGCGCGCGC CGCTGCGCCA TCGGCGCCAG GCGGGGCGGG CAAGGAGGTC AAGTCGGCCA AGCTGTCGTC CAGCTGGGCC AACGACACGA CCAAGAAGAA GGAAATCAAG ACCCGCGGCG ACAGCAGTGG CGGCGTGGGT CGCAACAACT GGCGTGGCGG CCCCCGCGGC CGCCGCGGCA ATGACCGCGA CGACCAGCGC CAGCAGCAGG CAGCCACAGA GTTCCGCGTG CTCGAGGTCT ATGTGCCCGA GACCATCACG GTGGCCGAGT TGGCGCACAA GATGGCCATC AAGGCTTCCG AAGTGATCAA GTCGCTCATG AAGATGGGCC AGATGGTCAC CATCAACCAG CCGCTGGACC AGGACACCGC CATGATCGTG GTGGAGGAAA TGGGCCACAC CGCGAAGGTG GCCGCTCTGG ATGATCCGGA AGCCTTCACC GCCGAGGAAG TGTCCAGCCA GGATGCCGAA CAACTGTCCC GCGCCCCCGT GGTGACGGTG ATGGGCCACG TGGACCACGG CAAGACCTCA CTGCTGGACT ACATCCGGCG CAGCAAGGTA GCCTCTGGCG AAGCTGGCGG CATTACCCAG CACATCGGCG CCTACCATGT GGAGACGCCA CGCGGTATCG TCACGTTCCT GGACACGCCG GGCCACGAGG CCTTCACGGC CATGCGTGCG CGCGGCGCCC AGGCCACCGA CATCGTGATT CTGGTGTGTG CGGCAGACGA CGGCGTGATG CCCCAGACCA AGGAAGCCAT CAAGCACGCG AAGGCGGCTG GTGTTCCCAT CGTGGTGGCG CTTACCAAGG CAGACAAGCC CGAGGCCAAC ATCGAGCGCG TCAAGCAGGA ACTGGTGGGC GAGCAGGTGG TGCCTGAGGA ATACGGCGGC GATTCGCCAT TCGTGGCCGT GTCGTCCAAG ACGGGCATGG GCATCGATGC TCTGCTGGAG CAGGTGCTGC TCCAGGCCGA GGTGCTGGAA CTCAAGGCTC CCGTCGATGC GGCTGCCAAG GGTATCGTCA TCGAGGCCCA ACTGGACAAG GGCCGCGGGT CCGTGGCTAC CGTGCTGGTG CAGTCCGGTA CGCTCAAGGT GGGCGATGTG GTGCTGGCAG GCCAGACTTT CGGCCGCGTG CGCGCCATGC TGGACGAAGA CGGCAAGCAG ACCAAGGAAG CCGGCCCGTC GATCCCGGTG GAGATCCAGG GCCTGAACGA AGTGCCCCAG GCGGGCGACG ACTTCATGGT GCTGCAGGAC GAACGCCGCG CCCGCGAGAT CGCGACGTAC CGCGCTGGCA AGTTCCGCAA CACCAAGCTG GCCAAGCAAC AGGCGGCCAA GCTGGAGAAC ATGTTTGCCG AGATGGGGGC GGGCGAGGTG CAGACCCTGC CGCTGATCAT CAAGGCGGAC GTGCAGGGCT CCCAGGAGGC GCTGGCGGCT TCGCTGCTCA AGCTCTCCAC CGAAGAGATC CGCGTGCAGA TCGTGTACTC CGGCGTGGGC GGCATCAGCG AGTCGGACGT CAACCTGGCG ATCGCCTCCA AGGCCATCGT CATTGGCTTC AACGTGCGCG CCGATGCGCA GGCCCGCAAA ACGGCCGAAG GCAACGACGT GGACATCCGC TACTACAACA TCATCTACGA CGCCGTGGAT GAAGTGAAGG CAGCGATGTC CGGCATGCTG GCGCCCGAAC AGCGCGAGGA AGCCATCGGC ACGGCCGAGA TCCGTACCGT GTTCGTGGCC TCCAAGATCG GTACCGTGGC GGGTTCGTAC ATCACGTCGG GCCAGGTCAC GCGCAACTGC AAGTTCCGCC TGCTGCGCGA CAACATCGTC ATCTACACGG GCGATGTGGA ATCGGTGCGC CGCATGAAGG ACGACGTCAA GGAAGTCAAG GAAGGCTTCG AGTGCGGTAT CAAGCTCAAG AACTACAACG ACATCAAGGA AGGTGATCAG CTGGAGTTCT TCGAGATCAA GGAAATCGCA CGCACGCTGT AA
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Protein sequence | MSSNTVAEFA AELKKSPETL LDQLKSAGVV KASPSDVLNE ADKQKLLAHL QASHGTAGGD RKKITLVKKS TSEIKQADAS GKARTIQVEV RKKRTFIKRD DSVDAPSDAT ESAPSAEDLE LVRREEEARR QAELIRRQEE ELALTRRERE ERERREREAE ERAAAYAAQQ AEKKAQESAE RAEAQREAAV EAEERAKAQA DARAKADEES KARAAEETAR AADLDERRRK ALAEAEAIRA MMAAPKKVLV AKKPEEPKPA AKAGASGDAK KGTLHKPATG SGTGARAAAP SAPGGAGKEV KSAKLSSSWA NDTTKKKEIK TRGDSSGGVG RNNWRGGPRG RRGNDRDDQR QQQAATEFRV LEVYVPETIT VAELAHKMAI KASEVIKSLM KMGQMVTINQ PLDQDTAMIV VEEMGHTAKV AALDDPEAFT AEEVSSQDAE QLSRAPVVTV MGHVDHGKTS LLDYIRRSKV ASGEAGGITQ HIGAYHVETP RGIVTFLDTP GHEAFTAMRA RGAQATDIVI LVCAADDGVM PQTKEAIKHA KAAGVPIVVA LTKADKPEAN IERVKQELVG EQVVPEEYGG DSPFVAVSSK TGMGIDALLE QVLLQAEVLE LKAPVDAAAK GIVIEAQLDK GRGSVATVLV QSGTLKVGDV VLAGQTFGRV RAMLDEDGKQ TKEAGPSIPV EIQGLNEVPQ AGDDFMVLQD ERRAREIATY RAGKFRNTKL AKQQAAKLEN MFAEMGAGEV QTLPLIIKAD VQGSQEALAA SLLKLSTEEI RVQIVYSGVG GISESDVNLA IASKAIVIGF NVRADAQARK TAEGNDVDIR YYNIIYDAVD EVKAAMSGML APEQREEAIG TAEIRTVFVA SKIGTVAGSY ITSGQVTRNC KFRLLRDNIV IYTGDVESVR RMKDDVKEVK EGFECGIKLK NYNDIKEGDQ LEFFEIKEIA RTL
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