| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1230 |
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| Symbol | |
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| ID | 7383132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 1291782 |
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| End bp | 1293146 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643654549 |
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| Product | membrane-associated zinc metalloprotease |
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| Protein accession | YP_002552697 |
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| Protein GI | 222110433 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.718345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCTGA CTGTCGTTGC CTTCATCGTT GCGTTGGGCG TGCTGATCGC CGTGCACGAG
TACGGCCATT ACCGCGTGGC GGTGGCCTGC GGTGTCAAGG TCCTCCGCTT CTCGGTCGGC
TTTGGCAAGC CTTTGCTGCG TTGGCAGCCT AAGGGCTCAC CCACGGAATT CGTCATCGGC
GCCTTTCCGC TGGGAGGGTA CGTGCGCATG CTGGACGAGC GTGAGGCGCC CGTTGAGCCG
CATGAACGCC ACCTGGCCTT CAATACCCAG CCCCTGCGTT CGCGCGCCGC CATCGTTGCC
GCGGGGCCGC TGGCCAATCT ACTGCTGGCG GTGCTGTTGT ATGCCGCCGT CAACTGGAGC
GGCGTGGACG AGCCCAAGGC CTACCTGGCC AGCCCTGTAG CGGGGTCGGT GGCCGAGCAG
GCGGGCCTGC GCGGCGGCGA ACTGGTGGTG TCCGCCGGGC TGGGCGAGGG CGATTTCGAG
CCCGTGCGCT CGTTCGAAGA CCTGCGTTGG ACGCTCACGC GCGGCGCGCT GGACGGGCAG
AACGTGCGGC TGCTGCTGCA GCCTGAGCGC GGCTCGACGC CGCGCGAGGT GCTGTTGCGC
ATAGATCAGC TGGACGTGCG CGAGGCCGAT GTGCAGCTGT ATCGCCGCAT CGGCATCACC
GCGCCCTGGA CGCGACCCGT GCTGGGCGAG GTCGTGCCAG GCGGCGCGGC TGCGCGTGCG
GGGCTGCGCG CTGGTGATGT GGTTCTGCGC CTGGGCAGTG CGGCGGTGGT GGACGGCGTG
CAACTGCGCG AGCTGATACG CGCGTCCGTG CAGGCGGGCC AGCCGCTCAC GCAGGTCTGG
CGCATCGAGC GCGACGGTCA GCCGCGCGAC CTGGAAGTCA CGCCCGAAGT GGCACAGGAG
GCGGGCGGCG CCGTGGGACG CGTCGGCGCC TATGTGGGCG CGCCGCCCGA GATGGTGAAC
GTGCATTACG GCCCCTTGGA AGGGCTCTGG AAAGGCACGG TGCGCACATG GGAGGTGTCG
GTCCTCACGC TGCGCATGAT GGGCCGCATG GTGATCGGTG AGGCTTCGCT CAAGAACCTC
AGCGGGCCGC TGACCATCGC CGATTACGCA GGCCGTTCCG CCAGCATGGG GCTGACCCAG
TACCTCAGCT TCCTCGCACT CATCAGCGTG AGCCTGGGAG TGCTGAACCT GCTTCCGCTG
CCCGTATTGG ATGGTGGGCA CCTGATGTAT TATCTTTGGG AGGGGGTGAC GGGACGGGGC
GTGTCCGAAG CCTGGATGGA GCGGCTGCAG CGCACAGGCG TCGCGGTGCT TCTCCTCATG
ATGTCCATCG CCCTGTTCAA CGACCTCACC CGGCTTTTTG GCTAA
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| Protein sequence | MLLTVVAFIV ALGVLIAVHE YGHYRVAVAC GVKVLRFSVG FGKPLLRWQP KGSPTEFVIG
AFPLGGYVRM LDEREAPVEP HERHLAFNTQ PLRSRAAIVA AGPLANLLLA VLLYAAVNWS
GVDEPKAYLA SPVAGSVAEQ AGLRGGELVV SAGLGEGDFE PVRSFEDLRW TLTRGALDGQ
NVRLLLQPER GSTPREVLLR IDQLDVREAD VQLYRRIGIT APWTRPVLGE VVPGGAAARA
GLRAGDVVLR LGSAAVVDGV QLRELIRASV QAGQPLTQVW RIERDGQPRD LEVTPEVAQE
AGGAVGRVGA YVGAPPEMVN VHYGPLEGLW KGTVRTWEVS VLTLRMMGRM VIGEASLKNL
SGPLTIADYA GRSASMGLTQ YLSFLALISV SLGVLNLLPL PVLDGGHLMY YLWEGVTGRG
VSEAWMERLQ RTGVAVLLLM MSIALFNDLT RLFG
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