| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1229 |
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| Symbol | |
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| ID | 7383131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 1290491 |
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| End bp | 1291663 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643654548 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_002552696 |
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| Protein GI | 222110432 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.599463 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAAC GTCTCACGGT GCTGGGTTCT ACGGGATCCA TCGGCACCAG CACCCTCGAC
GTGGTGGCAC GCCACCCCGA TCGCTACGAA GTCTTTGCGC TGAGCGCGGC CACGCAGGTG
GACCTGATGC TGGCGCAGTG CGCGCAGTTC CGTCCGCGCT ATGCGGTGAT GGCCAGCAGT
GCGCATGCGC GCCAGCTGGC AGACAAACTG CAGCAGAGCG GCTTGCCCAC CGAGGTGCTG
CAAACACCCG ATGCGCTGCA AGCCATTGCC TCGCACGAAG AGGTGGACGC GGTCATGGCG
GCCATCGTGG GCGCGGCGGG CCTGGCGCCG TGCCTGGCGG CCGCGCGTGC GGGCAAGCGC
CTGCTGCTGG CCAACAAGGA GGCGCTGGTC GTCGGGGGCG AGGTGTTCAT GGCCGCGGTG
CGCGAAGGCG GCGCCACGCT GCTGCCCATC GACAGCGAGC ATTCCGCCAT CTTCCAGAGC
CTGCCCGAAG ACCCCGCCAC CTGGCCGCGG CGCGTGGACC ACGTGCTGCT CACCGCGTCG
GGCGGGCCGT TTCGCACGCG CGACCCGGCC ACGCTGCGCG ACGTGACGCC GGCGCAGGCC
TGCGCGCATC CCAACTTCTC GATGGGCCGC AAGATTTCCA TCGACTCGGC CACGATGATG
AACAAGGCGC TGGAGGTGAT CGAGGCGCGC TGGCTGTTCA ACCTGGCGCC TGAGCAGATC
AAGGTGGTCA TCCACCCGCA GCAGATCATC CACTCCATGG TGCAGTTTGT GGACGCGTCC
ATCATTGCCC AGTTGGGCAC GCCCGATATG CGCGTGCCCA TCGCCTGTGG CCTGGCCTGG
CCCGAGCGGG TGGAAAGCGG CGCGGCGCCC CTGGATTTCA CGCAACTGGC AGCGCTGACC
TTCGAAGAAG CGGATGCCAC GCGCTTTCCC GGGCTGCACC TGTCCTGGCA GGCGTTGCGC
GCGGCGCCCG GCACCACGGC CGTGCTCAAT GCCGCCAACG AGGTGGCAGT GGCGGCTTTC
CTGGAGCAGC GCATACGTTT CGACCAGATC CATGCGCTCA ACCTTGCAAC TTTGGAAGCC
GTCGAACCGT CCAACCCGGA CTCGCTGGAC GCACTGCTGG CGCTGGATGC GCGCACGCGT
GCGCGGTCCG CGGAGTTGAT GGCGCGCTTG TGA
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| Protein sequence | MKQRLTVLGS TGSIGTSTLD VVARHPDRYE VFALSAATQV DLMLAQCAQF RPRYAVMASS
AHARQLADKL QQSGLPTEVL QTPDALQAIA SHEEVDAVMA AIVGAAGLAP CLAAARAGKR
LLLANKEALV VGGEVFMAAV REGGATLLPI DSEHSAIFQS LPEDPATWPR RVDHVLLTAS
GGPFRTRDPA TLRDVTPAQA CAHPNFSMGR KISIDSATMM NKALEVIEAR WLFNLAPEQI
KVVIHPQQII HSMVQFVDAS IIAQLGTPDM RVPIACGLAW PERVESGAAP LDFTQLAALT
FEEADATRFP GLHLSWQALR AAPGTTAVLN AANEVAVAAF LEQRIRFDQI HALNLATLEA
VEPSNPDSLD ALLALDARTR ARSAELMARL
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