| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1199 |
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| Symbol | |
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| ID | 7383101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 1259603 |
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| End bp | 1261339 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643654519 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_002552667 |
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| Protein GI | 222110403 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTTG AAGAACTGAA GCTGGCGCCG GCCATTTTGC GGGCCGTGCA AGAACAAGGC
TACGACAACC CGACCCCTAT CCAGGCCCAG GCCATCCCGG CCGTCCTCGC TGGACACGAC
CTCCTCGCCG GGGCACAGAC CGGCACTGGC AAGACCGCCG CGTTCACGCT GCCCATGCTG
CACCGCCTGG CCGAAGGCCA AGCCCCACGC AGCCAGTTTG GCGGCAAGGG TGTGCGCGCC
CTGGTGCTCA CGCCCACGCG GGAGCTGGCA GCGCAGGTCG AAGAATCCGT GCGCGGCTAC
GGCAAATACC TGGATCTGAA CTCCACCGTG ATCTTCGGCG GCGTCGGTAT GAACCCCCAG
ATCGAACGCA TCAAGCGCGG CGTGGACGTG CTGGTGGCCA CCCCTGGCCG CCTGCTGGAC
CTGCAGCAGC AAGGCTTCAT GGACCTGTCC ACCGTCGAGA TCCTGGTGCT GGACGAAGCC
GACCGCATGC TCGACATGGG CTTCATCCAC GACGTGAAGA AGGTGCTGGC GCTGCTGCCC
CAGTCCAAGC AAAGCCTGCT GTTCTCGGCC ACGTTCAGCG ACGACATCCG TGAACTGGCC
AACTCACTGC TCAAGAACCC GCAGAGCATC CAGGTCACCC CGCGCAACAC CACGGTGCAA
CGCATCAGCC AGGTGATCCA CCCCGTGGGG CGCGGCAAGA AAAAGCAGGT GCTGCTGCAC
ATCATCCAGG AACACGACTG GAGCCAGGTG CTGGTGTTCA CGCGCACCAA GTTCGGCGCC
AACAACGTGG CCGAGTACCT GACCAAGAAC GGCGTTTCGG CCATGGCGCT GCATGGCAAC
AAGAGCCAGA GCGCCCGCAC CCAGGCGCTG GAGGGCTTCA AGACGGGCCA GATTCGCGCC
CTGGTGGCTA CCGACATCGC GGCACGCGGC ATCGACATCG ACGACCTGCC GCACGTCGTG
AACTACGAAA TCCCCAACGT GCCCGAGGAC TACGTGCACC GCATCGGCCG CACGGGCCGC
GCCGGCCGCG AGGGCCATGC CGTGAGCCTC GTCTGCATGG ACGAGGAAGG TTTCATGATG
GAGATTGAGC GCTTCACCAA GCAGGAAATC CCCGTGCAGG TGATCGACGG CTTTGGTCCG
GACGAGGGAG AGAAGGCCGA ACCCATCGCC ATGGGCCGCC AGACCATCTG GGGCGGCGCG
GGCAAGCCAC CCAGCCGCGA AGTCATGCAG GCAGCGGCCA AGGCGGCACG CCAGGAGATG
ATGGAGCGCA TCCGCACCAA CAAGGCGGCC ACTGGCGGCC AGCGCGGTTC GCGCCAAGGC
GGCGGTGGCC AGGGCGAAGG CCAGCAGCGC GCCGGGGGCC AGAACGGCAG CGGGGGCCGC
GGCGGCAACG CAGGCAATGC GGGCCGTCCT GCCGGCCCAC GTGATCAGCA ACGTCCGCAG
AACACGGCCG GTGGCCGCCG CCGCGGCGGT CCGGCTGGTG CAGGCAATGG CGGGGGTAAT
GGCGGAAATC GCCGTTTCGA CGACAGCCAG CCTCGCAGCG AGAACGCCCA CCTGGGCACG
CAGCTCGGCA ACATTGGCAT CGGCCCACGC CATGGCAGCG GCCGTGCCAG CCAGCCGGAC
CCCATGCGCA CCAGCGTGGA CAGCATGGCG GACCGCGGGC GTCGGGGCGG CTTCGGCCGT
GGCAACGGCG GCGGCGGTGG TGGCCGCGGC CCACGCGGCG GCGGCTTCGG CCGCTGA
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| Protein sequence | MTFEELKLAP AILRAVQEQG YDNPTPIQAQ AIPAVLAGHD LLAGAQTGTG KTAAFTLPML
HRLAEGQAPR SQFGGKGVRA LVLTPTRELA AQVEESVRGY GKYLDLNSTV IFGGVGMNPQ
IERIKRGVDV LVATPGRLLD LQQQGFMDLS TVEILVLDEA DRMLDMGFIH DVKKVLALLP
QSKQSLLFSA TFSDDIRELA NSLLKNPQSI QVTPRNTTVQ RISQVIHPVG RGKKKQVLLH
IIQEHDWSQV LVFTRTKFGA NNVAEYLTKN GVSAMALHGN KSQSARTQAL EGFKTGQIRA
LVATDIAARG IDIDDLPHVV NYEIPNVPED YVHRIGRTGR AGREGHAVSL VCMDEEGFMM
EIERFTKQEI PVQVIDGFGP DEGEKAEPIA MGRQTIWGGA GKPPSREVMQ AAAKAARQEM
MERIRTNKAA TGGQRGSRQG GGGQGEGQQR AGGQNGSGGR GGNAGNAGRP AGPRDQQRPQ
NTAGGRRRGG PAGAGNGGGN GGNRRFDDSQ PRSENAHLGT QLGNIGIGPR HGSGRASQPD
PMRTSVDSMA DRGRRGGFGR GNGGGGGGRG PRGGGFGR
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