| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1193 |
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| Symbol | |
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| ID | 7384628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 1252504 |
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| End bp | 1254987 |
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| Gene Length | 2484 bp |
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| Protein Length | 827 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643654515 |
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| Product | EcoEI R domain protein |
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| Protein accession | YP_002552664 |
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| Protein GI | 222110400 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.325861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAAA CCAAACTCTC CGAAAGCGAC ATTTGCGAAA AGTTCATCCG GCCGGCCATG
GAGCAGGCGG GCTGGGACGG CATGGACCAG ATCTACCGGG AGTACCCGTT GCGCGCGGGC
CGTGTGGTGG TGCGCGGCAG GCAGGCCCAG CGCGACAAAA GCACCGTGCT GCGTGCCGAC
TACGCCCTGT TCTTCAAGGC CAACATCCCC CTGGCCGTGG TGGAGGCCAA GGACAACCAG
CATGCCGTGG GCGCAGGCAT GGGGCAGGCC ATCCAATATG CCGAGCTGCT GGGCGTGCCG
TTCAGTTTCG CCAGCAATGG CGATGGCTTC GTGTTCCGTG ATGCCACGCT GGCCGATGGT
GTGCTGGAGC GCAACCTGAC TCTGGAGGAA TTTCCGTCAC CTGCCGAGCT GTGGAGTCGC
TACTGCGCCT GGAAGGGCTG GTCCGCCGAA GAAAGCCGCA TCGCCGGCTT TGACTACGCC
CCCAACAAGA CCCCGCGCTA CTACCAGCTG AACGCCGTGA ACCGCGCTGT CGAAGCCATC
GCCGCAGGGC AAGACCGCGT GCTGCTGGTC ATGGCCACCG GCACCGGCAA GACCTATACC
GCCTTCCAGA TCATCTGGCG CCTGTGGAAG AGCGGCGCCA AGAAGCGCAT CTTGTTCCTG
GCCGACCGCA ACATCCTCAT CGACCAGACC ATGGTCAACG ACTTTCGCCC CTTCAAGGGC
GCCATGGCCA AGCTCAGCCC CAACGCCAAG GGCGTGGAGC GTGTCGATGC GCAGGGCGCG
GTGTCGGTCG AAGACGTGGA CTTGGCTGTC AACAAAACTA CCAAGCTGGT GGACAAGAGC
TACGAGATTT ACTTGTCGCT GTACCAGGCC GTCACCGGCA CCGAGGAAGA GCGCAACATC
TACAAGCAGT TCAGCCCCGA CTTTTTCGAC CTGATCGTGG TGGACGAATG CCACCGGGGC
AGTGCAGCCG AAGACTCCGC TTGGCGCGAC ATCCTCACCT ACTTTGCCGG CGCCACGCAG
ATCGGCCTCA CCGCCACGCC CAAAGAAACC AAGGACGTTT CCAACACCGA CTACTTCGGC
GAGCCCGTCT ACACCTACAG CCTCAAGCAA GGCATCGAAG ACGGCTACCT GGCGCCGTAC
AAGGTCATCC GCGTCGATCT GGACAAAGAC ACCTTTGGCT GGCGCCCCAC GGCGGGCATG
ACCGACAAAC ACGGCCACGC CATCGAAGAC CGCATCTACA CCGGCGCCGA CATGAACCGC
AAGCTCGTGC TGGAGCAGCG CGACGCCGTG GTGGCCGCCA AGATCACCGA ATACCTCAAG
GCCACCGACC GCTACGCCAA AACCATCGTC TTTTGCGAAG ACATCGACCA CGCCGCGCGC
ATGCGCCAAG CGCTGAGCAA CGCCAACGCC GACCTGTGCG CCACCCAGCC CAAATATGTG
GTGCAGATCA CCGGCGACAA CATCGAAGGC AAGCTGGAAC TCGACAACTT CATCGACCCC
GAGAAAACCT ACCCGGTGAT CGCCACCACC TCCAAGCTCA TGAGCACCGG GGTGGATGCC
CAGACCTGCA AGCTCATCGT GCTGGACCAG ACCATCAAGT CCATGACGCT GTTCAAGCAG
ATCATCGGCC GTGGCACCCG CCTGCGCGAA GACCTGGGCA AGACCTGGTT CACCATCCTC
GACTTCAAGC GCGCCACTGA ACTGTTTGCC GACAAGGACT TTGATGGCGA GCCCGTGCAA
ATCTACGAGC CGGGCAGCGG GCAGCCCGTG GCGCCGCCCG AACCGGCAAT GCCAGGCGAC
ATTCCGGGCG ACGCAGGCAC GCCCGGCGGT GCGGCAAACC CTCTGGACCC TCTTGACCCC
CTGAACCCTC TTGGCCCCTT CGCGGGCGGC GGTGGTGCGG GTGCCGGCCC CAAGAAATAT
GTCCTCGGCA ACAACGTCAC CGTGTCCGTG GCGCGCGAGC GCGTGCAGTA CCTCAACGCC
CAGGGCAAGC TCATCACCGA AAGCCTGCGC GACTACACCC GCATCAACCT GCGCAAGCAA
TACGACTCGC TCGACCAGTT CCTGCAGGCC TGGCAGCAGG CCGACCGCAA GGCCGTGCTC
CTGCAAGAGC TCGAAGGGCA GGGCGTGCCG CTGGAGGCCT TGGCCGACGA GGTAGGTAAA
GACCTCGACC CATTTGATCT GCTGCTGCAT GTGGCCTATG ACCAGCCCCC GCTCACCCGC
CGCGAACGCG CCCGCCGCGT GCAAAAGCGC AACGTCTTCA CCCAATACGG CCCCGTGGCC
CGCAAGGTGC TCGACGCCCT GCTCGACAAA TACGCCGATG AAGGCATCGC CACCATCGAG
AGCAACGAAG TCTTCAAGCT CCAGCCCTTT ACCGATCTGG GCAGCCCTGT CGAGCTGGTG
CGCAGCTTTG GTGGCCGCCC CCAATACCTC AGCGCACTGC AGGCGCTGGA GCAAGCGCTG
TACGCTACGC ACCCGGCCCA CTAG
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| Protein sequence | MDKTKLSESD ICEKFIRPAM EQAGWDGMDQ IYREYPLRAG RVVVRGRQAQ RDKSTVLRAD
YALFFKANIP LAVVEAKDNQ HAVGAGMGQA IQYAELLGVP FSFASNGDGF VFRDATLADG
VLERNLTLEE FPSPAELWSR YCAWKGWSAE ESRIAGFDYA PNKTPRYYQL NAVNRAVEAI
AAGQDRVLLV MATGTGKTYT AFQIIWRLWK SGAKKRILFL ADRNILIDQT MVNDFRPFKG
AMAKLSPNAK GVERVDAQGA VSVEDVDLAV NKTTKLVDKS YEIYLSLYQA VTGTEEERNI
YKQFSPDFFD LIVVDECHRG SAAEDSAWRD ILTYFAGATQ IGLTATPKET KDVSNTDYFG
EPVYTYSLKQ GIEDGYLAPY KVIRVDLDKD TFGWRPTAGM TDKHGHAIED RIYTGADMNR
KLVLEQRDAV VAAKITEYLK ATDRYAKTIV FCEDIDHAAR MRQALSNANA DLCATQPKYV
VQITGDNIEG KLELDNFIDP EKTYPVIATT SKLMSTGVDA QTCKLIVLDQ TIKSMTLFKQ
IIGRGTRLRE DLGKTWFTIL DFKRATELFA DKDFDGEPVQ IYEPGSGQPV APPEPAMPGD
IPGDAGTPGG AANPLDPLDP LNPLGPFAGG GGAGAGPKKY VLGNNVTVSV ARERVQYLNA
QGKLITESLR DYTRINLRKQ YDSLDQFLQA WQQADRKAVL LQELEGQGVP LEALADEVGK
DLDPFDLLLH VAYDQPPLTR RERARRVQKR NVFTQYGPVA RKVLDALLDK YADEGIATIE
SNEVFKLQPF TDLGSPVELV RSFGGRPQYL SALQALEQAL YATHPAH
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