Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1193 |
Symbol | |
ID | 7384628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 1252504 |
End bp | 1254987 |
Gene Length | 2484 bp |
Protein Length | 827 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643654515 |
Product | EcoEI R domain protein |
Protein accession | YP_002552664 |
Protein GI | 222110400 |
COG category | [V] Defense mechanisms |
COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.325861 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATAAAA CCAAACTCTC CGAAAGCGAC ATTTGCGAAA AGTTCATCCG GCCGGCCATG GAGCAGGCGG GCTGGGACGG CATGGACCAG ATCTACCGGG AGTACCCGTT GCGCGCGGGC CGTGTGGTGG TGCGCGGCAG GCAGGCCCAG CGCGACAAAA GCACCGTGCT GCGTGCCGAC TACGCCCTGT TCTTCAAGGC CAACATCCCC CTGGCCGTGG TGGAGGCCAA GGACAACCAG CATGCCGTGG GCGCAGGCAT GGGGCAGGCC ATCCAATATG CCGAGCTGCT GGGCGTGCCG TTCAGTTTCG CCAGCAATGG CGATGGCTTC GTGTTCCGTG ATGCCACGCT GGCCGATGGT GTGCTGGAGC GCAACCTGAC TCTGGAGGAA TTTCCGTCAC CTGCCGAGCT GTGGAGTCGC TACTGCGCCT GGAAGGGCTG GTCCGCCGAA GAAAGCCGCA TCGCCGGCTT TGACTACGCC CCCAACAAGA CCCCGCGCTA CTACCAGCTG AACGCCGTGA ACCGCGCTGT CGAAGCCATC GCCGCAGGGC AAGACCGCGT GCTGCTGGTC ATGGCCACCG GCACCGGCAA GACCTATACC GCCTTCCAGA TCATCTGGCG CCTGTGGAAG AGCGGCGCCA AGAAGCGCAT CTTGTTCCTG GCCGACCGCA ACATCCTCAT CGACCAGACC ATGGTCAACG ACTTTCGCCC CTTCAAGGGC GCCATGGCCA AGCTCAGCCC CAACGCCAAG GGCGTGGAGC GTGTCGATGC GCAGGGCGCG GTGTCGGTCG AAGACGTGGA CTTGGCTGTC AACAAAACTA CCAAGCTGGT GGACAAGAGC TACGAGATTT ACTTGTCGCT GTACCAGGCC GTCACCGGCA CCGAGGAAGA GCGCAACATC TACAAGCAGT TCAGCCCCGA CTTTTTCGAC CTGATCGTGG TGGACGAATG CCACCGGGGC AGTGCAGCCG AAGACTCCGC TTGGCGCGAC ATCCTCACCT ACTTTGCCGG CGCCACGCAG ATCGGCCTCA CCGCCACGCC CAAAGAAACC AAGGACGTTT CCAACACCGA CTACTTCGGC GAGCCCGTCT ACACCTACAG CCTCAAGCAA GGCATCGAAG ACGGCTACCT GGCGCCGTAC AAGGTCATCC GCGTCGATCT GGACAAAGAC ACCTTTGGCT GGCGCCCCAC GGCGGGCATG ACCGACAAAC ACGGCCACGC CATCGAAGAC CGCATCTACA CCGGCGCCGA CATGAACCGC AAGCTCGTGC TGGAGCAGCG CGACGCCGTG GTGGCCGCCA AGATCACCGA ATACCTCAAG GCCACCGACC GCTACGCCAA AACCATCGTC TTTTGCGAAG ACATCGACCA CGCCGCGCGC ATGCGCCAAG CGCTGAGCAA CGCCAACGCC GACCTGTGCG CCACCCAGCC CAAATATGTG GTGCAGATCA CCGGCGACAA CATCGAAGGC AAGCTGGAAC TCGACAACTT CATCGACCCC GAGAAAACCT ACCCGGTGAT CGCCACCACC TCCAAGCTCA TGAGCACCGG GGTGGATGCC CAGACCTGCA AGCTCATCGT GCTGGACCAG ACCATCAAGT CCATGACGCT GTTCAAGCAG ATCATCGGCC GTGGCACCCG CCTGCGCGAA GACCTGGGCA AGACCTGGTT CACCATCCTC GACTTCAAGC GCGCCACTGA ACTGTTTGCC GACAAGGACT TTGATGGCGA GCCCGTGCAA ATCTACGAGC CGGGCAGCGG GCAGCCCGTG GCGCCGCCCG AACCGGCAAT GCCAGGCGAC ATTCCGGGCG ACGCAGGCAC GCCCGGCGGT GCGGCAAACC CTCTGGACCC TCTTGACCCC CTGAACCCTC TTGGCCCCTT CGCGGGCGGC GGTGGTGCGG GTGCCGGCCC CAAGAAATAT GTCCTCGGCA ACAACGTCAC CGTGTCCGTG GCGCGCGAGC GCGTGCAGTA CCTCAACGCC CAGGGCAAGC TCATCACCGA AAGCCTGCGC GACTACACCC GCATCAACCT GCGCAAGCAA TACGACTCGC TCGACCAGTT CCTGCAGGCC TGGCAGCAGG CCGACCGCAA GGCCGTGCTC CTGCAAGAGC TCGAAGGGCA GGGCGTGCCG CTGGAGGCCT TGGCCGACGA GGTAGGTAAA GACCTCGACC CATTTGATCT GCTGCTGCAT GTGGCCTATG ACCAGCCCCC GCTCACCCGC CGCGAACGCG CCCGCCGCGT GCAAAAGCGC AACGTCTTCA CCCAATACGG CCCCGTGGCC CGCAAGGTGC TCGACGCCCT GCTCGACAAA TACGCCGATG AAGGCATCGC CACCATCGAG AGCAACGAAG TCTTCAAGCT CCAGCCCTTT ACCGATCTGG GCAGCCCTGT CGAGCTGGTG CGCAGCTTTG GTGGCCGCCC CCAATACCTC AGCGCACTGC AGGCGCTGGA GCAAGCGCTG TACGCTACGC ACCCGGCCCA CTAG
|
Protein sequence | MDKTKLSESD ICEKFIRPAM EQAGWDGMDQ IYREYPLRAG RVVVRGRQAQ RDKSTVLRAD YALFFKANIP LAVVEAKDNQ HAVGAGMGQA IQYAELLGVP FSFASNGDGF VFRDATLADG VLERNLTLEE FPSPAELWSR YCAWKGWSAE ESRIAGFDYA PNKTPRYYQL NAVNRAVEAI AAGQDRVLLV MATGTGKTYT AFQIIWRLWK SGAKKRILFL ADRNILIDQT MVNDFRPFKG AMAKLSPNAK GVERVDAQGA VSVEDVDLAV NKTTKLVDKS YEIYLSLYQA VTGTEEERNI YKQFSPDFFD LIVVDECHRG SAAEDSAWRD ILTYFAGATQ IGLTATPKET KDVSNTDYFG EPVYTYSLKQ GIEDGYLAPY KVIRVDLDKD TFGWRPTAGM TDKHGHAIED RIYTGADMNR KLVLEQRDAV VAAKITEYLK ATDRYAKTIV FCEDIDHAAR MRQALSNANA DLCATQPKYV VQITGDNIEG KLELDNFIDP EKTYPVIATT SKLMSTGVDA QTCKLIVLDQ TIKSMTLFKQ IIGRGTRLRE DLGKTWFTIL DFKRATELFA DKDFDGEPVQ IYEPGSGQPV APPEPAMPGD IPGDAGTPGG AANPLDPLDP LNPLGPFAGG GGAGAGPKKY VLGNNVTVSV ARERVQYLNA QGKLITESLR DYTRINLRKQ YDSLDQFLQA WQQADRKAVL LQELEGQGVP LEALADEVGK DLDPFDLLLH VAYDQPPLTR RERARRVQKR NVFTQYGPVA RKVLDALLDK YADEGIATIE SNEVFKLQPF TDLGSPVELV RSFGGRPQYL SALQALEQAL YATHPAH
|
| |