Gene Dtpsy_1185 details

Gene Information

• Locus tag: Dtpsy_1185
• Symbol: uvrC
• ID: 7384618
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 1242927
• End bp: 1244900
• Gene Length: 1974 bp
• Protein Length: 657 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643654505
• Product: excinuclease ABC subunit C
• Protein accession: YP_002552656
• Protein GI: 222110392
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0322] Nuclease subunit of the excinuclease complex
• TIGRFAM ID: [TIGR00194] excinuclease ABC, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCACAA CCTATTCGGA TGAGCTTCTG GCACAGGTGG CGGCGCTGCC ACCTTTGCCC 
GGGGTGTACC GCTACTTCGA TGCACAGAAT GTCTTGCTAT ATGTCGGCAA GGCGCGCAAC 
CTGAAAAAGC GGGTCAGCAG CTACTTCAGC AAGCAGCACG GAGGCACGCG CATTGGCCAT 
ATGGTGGGCA GAATTGCGCG GCTGGAAACG ACGGTGGTGC GCTCCGAGGC CGAGGCGCTC 
CTGCTGGAAA ACAATCTCAT CAAGTCCCTG GGCCCGAAGT ACAACATTCT TTTTCGGGAC 
GACAAGAGCT ACCCTTATCT CAAGATCACC GGTGTCTCGG CAAAGGACGG TACGGGGGAT 
GCTCCGGGGC AGTGCTACCC GCGCATGGCG TATTACCGCG GGGCAGTGGA TAAACGTCAC 
CGATACTTCG GTCCTTACCC TGGCGCATGG GCCGTCAAAG AAAGCATTCA GCTACTGCAG 
AAGGTTTTTC GGTTGCGTAC TTGTGAAGAC ACGGTGTTTG CGAATCGCAC GCGTCCCTGC 
TTGCTGTACC AGATCAAACG CTGCTCCGCT CCGTGTGTGG GTTTGATTTC CCCAACGGCC 
TATGCCGCAG ATGTGCGCAG TGCGGAGGCG ATGCTGCTGG GTGAAACCCA GGAACTGCTT 
CAAACGCTGG AAGAACGCAT GCTCGCGTAT GCCGAGAAGC TGGAGTTTGA ACAGGCGGCC 
GAGGTCCGCA ACCAGATCAC GGCACTCGCA CGTGTGTTGC ACCAACAAGC GGTGGAGACG 
GCATCGGACA AGGACGTGGA CATACTCGCC GTTAAAGTGG CTGGCGGCCG TGCCTGCGTC 
AACCTGGCGA TGGTGCGCGG TGGCCGGCAC CTTGGCGACA GGCCTTACTT TCCGGTTCAC 
GTAGAGGAAG CGACAGGTGT CTTCCAACTG GAAACGCGCG AGGATGCCCC GGATAACTTG 
ATGGTAGAGG AGGCTGGCGG ACTTGAGCAG TCGGTGCCGG CGCAGATCCT TGCTGCGTTC 
ATTGCGCAGC ACTACCTGGG GGTACCGTTG CCACCGACAC TGATTACGAG CGAGCCAGTC 
GACCCCGCAT TGCTTTGGGT GCTGGCACAG CAGACGGGGG TGCGAGCGAC AGTCGTCCAC 
CAGCCGCGTG AACAACGGCG AATCTGGCTG GAAATGGCGG AGCAGAACGC ACAGATCCAG 
TTGGCACGGT TGCTGGCGGA GGAGGGTTCC CAGCGGGCGC GCACGCGTGC CCTGGCGGAA 
GCGCTGGATC TGGAGGCAGA GAGCTTGGAT GACCTCACCA TCGAGTGTTT CGACATTTCG 
CACACTGCAG GGGAGGCGAC CCAGGCTTCT TGCGTGGTTT TTCATCACCA CAAAATGCAA 
AGTGGCGAGT ACCGCCGTTT CAAAATCGAG GGCATTACCC CGGGCGATGA CTATGCAGCT 
ATGCGTCAGG TACTCATGCG TCGCTACAGC AAGGTTGCCG AAGCACAGCG TGAGGCAGGG 
GGAGCGGAGG TGACAAATGC CCCGCGCTTG CCGGACCTGG TGCTGGTGGA CGGTGGCAAG 
GGGCAAGTAA GCATGGCGCG CGATGTGTTC CAGGAACTGG GCCTGGATAT CTCACGCATC 
GTTGGTGTCG AAAAGGGGGA GGGCCGCAAG GTGGGGCTGG AAGAACTGGT CTTTGCGGAT 
GGACGCGACA AAGTCTATCT GGGGCGAGAC TCGGCTGCGC TGATGCTCGT GGCGCAGATC 
CGTGACGAGG CCCACCGCTT CGCCATCACC GGAATGCGCG CCGCTCGTGC AAAAGTACGC 
GTAGGCGGCA GCCGATTGGA AGATATACCC GGTGTGGGGC CTAAAAAACG GGCAAGGCTG 
CTTCAGCGCT TTGGGGGCGT GCGCGGCGTG GCAGATGCCA GCGTGGACGA CCTCGCCACG 
GTCGAGGGCA TATCTCACGA CTTGGCTGAA GAGATCTATC GCGCGCTGCG CTGA 

 

Protein sequence

MTTTYSDELL AQVAALPPLP GVYRYFDAQN VLLYVGKARN LKKRVSSYFS KQHGGTRIGH 
MVGRIARLET TVVRSEAEAL LLENNLIKSL GPKYNILFRD DKSYPYLKIT GVSAKDGTGD 
APGQCYPRMA YYRGAVDKRH RYFGPYPGAW AVKESIQLLQ KVFRLRTCED TVFANRTRPC 
LLYQIKRCSA PCVGLISPTA YAADVRSAEA MLLGETQELL QTLEERMLAY AEKLEFEQAA 
EVRNQITALA RVLHQQAVET ASDKDVDILA VKVAGGRACV NLAMVRGGRH LGDRPYFPVH 
VEEATGVFQL ETREDAPDNL MVEEAGGLEQ SVPAQILAAF IAQHYLGVPL PPTLITSEPV 
DPALLWVLAQ QTGVRATVVH QPREQRRIWL EMAEQNAQIQ LARLLAEEGS QRARTRALAE 
ALDLEAESLD DLTIECFDIS HTAGEATQAS CVVFHHHKMQ SGEYRRFKIE GITPGDDYAA 
MRQVLMRRYS KVAEAQREAG GAEVTNAPRL PDLVLVDGGK GQVSMARDVF QELGLDISRI 
VGVEKGEGRK VGLEELVFAD GRDKVYLGRD SAALMLVAQI RDEAHRFAIT GMRAARAKVR 
VGGSRLEDIP GVGPKKRARL LQRFGGVRGV ADASVDDLAT VEGISHDLAE EIYRALR