Gene Dtpsy_1180 details

Gene Information

• Locus tag: Dtpsy_1180
• ID: 7384612
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: -
• Start bp: 1238731
• End bp: 1239330
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 643654500
• Product: putative secreted protein
• Protein accession: YP_002552652
• Protein GI: 222110388

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGCCCCT CTCCACCTTG GTTTCACCAT CCCGAACGCC GTCTGCTGGC GGGTTTTCTC 
GGCCTGCTTT GGTCGGTGCT GGCTGGCGGC TGCGCGACGA CGAGCGCGCC GGTCGCGCCC 
GACACCATCG AGGAAGTCTC GGCCGCACCC GTACCCGAGG CGCCCGAATA CATCCCCGTT 
GTGCGCTACG GCCGCTACAC CCTCGTGGAA CTGGCACCGA CAGCAGCGCA GCGCGACCTG 
CTGTTGCAGA CCATCGACGT GTCGATGCCC GAGGATGCAC GCGCTACGGT CGGCGACGGG 
CTACGGCATG TGCTCAAGCG CAGCGGTTAC GGCTTGTGCC AGACGACGCA CGCGGTGATC 
GAGCTGTACG CACTGCCGCT GCCGGCGGCC CACCTGCACC TCGGCCCCAT GACCCTGCGG 
GATGCGCTGC TCACCCTGGC TGGTTCGGCC TGGGAACTGC ACGCGGATGA CCGCGCGCGG 
CAAATCTGCT TCGAGCGGCC CGGCGACAGC ATGACCGCCG ACAACGTACC CGCGCCGCCT 
GCCACCGAGG CGGTGCAGAC GTTCCCGCTG GCGCCCGCGG CATCGGGAGG CCAGCCATGA 

 

Protein sequence

MCPSPPWFHH PERRLLAGFL GLLWSVLAGG CATTSAPVAP DTIEEVSAAP VPEAPEYIPV 
VRYGRYTLVE LAPTAAQRDL LLQTIDVSMP EDARATVGDG LRHVLKRSGY GLCQTTHAVI 
ELYALPLPAA HLHLGPMTLR DALLTLAGSA WELHADDRAR QICFERPGDS MTADNVPAPP 
ATEAVQTFPL APAASGGQP