| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1154 |
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| Symbol | |
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| ID | 7384586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 1216923 |
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| End bp | 1218428 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643654475 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002552627 |
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| Protein GI | 222110363 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.039626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAT CTTTCGCATT CACACGACCC GCCAGGACGC TGGCGCCGCT CGCCCTCGCG
GCGGCGCTGG CTGGCTGCTC CATGGCACCG AAGTATGACC GGCCCGCAGC GCCGATCGAC
ACGGCCTATC CCTCGGGCGC GGCCTATGTG GAACTGGCGG CCGCGACGCC CGACGACGCG
ATCACGGCCG AGATCGGTTG GCGGGACTTC TTCCGCGACC CGCTGCTGCA GCAGTTGATC
GGCATTTCGC TGGAGAACAA CCGCGACATG CACAAAGCCG CGCTCAACGT GGAGGCGGCT
CAGGCGCTGT ACCGTATCCA GCGTGCCGAG ATGCTGCCGA ACCTGGGCGT TTCCGCCCGC
GGCGCGTCAG AGCGCGTACC GGCCGACCTC AGTACCACGG GGCAAAGCGA CGTGCTCCGG
CGCTACGACG TGGCCGGGGT GACGGCCGCC TGGGAGCTGG ACCTGTGGGG CCGCATCCGC
AGCCTCAACG ACCGGGCGCT GGCGTCCTAC CTGGCCCTCG ACGAGACCCG CATCGCCACG
CAGATGAGCC TGGTGTCCGA GGTGGCCAGC GCCTACCTCA CGCTGCGCGC CGACCAGGAA
CTGCTGCGCC TGACGAGCGA CACCCTCGCC ACACAGAAGC GCTCCTATGA CCTGACCACC
CAACTGGTGG AAGCGGGAAA TTCCACGCAG CTCGACCTGC GCCGCGCGGA GATCGCGCTG
CGCACCGCCG AGGCCAACCG CGCCGCCTAC ACGCGGCAGG CGGCCAAGGA CCGCAACGCG
CTGGTGCTGC TGCTGGGCCA GCCGCTGACG CCGGAGCTGT CCCGGCAGCT TGACGAGGCC
GTGGCGCTGC CGGACGACAT CGTGCCGACC GACCTGCCGA GCGGCCTGCC GTCCGAACTG
CTCGCGCGTC GGCCGGACAT CCGCGCCGCC GAGCAGATGC TGATCGGCGC CAACGCCAAC
ATCGGCGCGG CGCGGGCCGC GTTCTTCCCG ACGATTAGCC TCACGGGCTC GGCGGGCACG
GCCAGCGCTT CGCTGGACGG CCTGTTCGAT TCGGGCTCGC GGGCCTGGAG CTTCCTGCCG
CAGATCACGC TGCCCATCTT CCGCGGCGGC GCGTTGCGAG CCAATCTGGA CGTGGCACAG
GTACAAAAGA GGATCGAAAT CGCCAACTAC GAGAAGTCTA TCCAGGCGGC CTTTGCTGAG
GTGGCTGACG GCTTGGCGGG CAAGCGCACG CTTGATGAGC AGATCCGCTC GGAGCAGCTC
CTGGTAGCGG CTAGCCAGAA AGCCTACCAA CTAGCCGAGC AACGCTTCCA GGAAGGCGTG
GACGACAACC TCACCTTGCT CGATGCGCAA CGCACACAGT ACGGTGCGCA GCAGACCCTG
GTGCGCACGC GCCTGACGCG GCTGAACAAC CTCATCCACC TCTACAAGGC GCTGGGTGGC
GGCTGGACTG AGCACACGGT GCAATCGGGC GCCACCGGGC AACCATCCGC CCGGTCGCCG
GGATAA
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| Protein sequence | MKTSFAFTRP ARTLAPLALA AALAGCSMAP KYDRPAAPID TAYPSGAAYV ELAAATPDDA
ITAEIGWRDF FRDPLLQQLI GISLENNRDM HKAALNVEAA QALYRIQRAE MLPNLGVSAR
GASERVPADL STTGQSDVLR RYDVAGVTAA WELDLWGRIR SLNDRALASY LALDETRIAT
QMSLVSEVAS AYLTLRADQE LLRLTSDTLA TQKRSYDLTT QLVEAGNSTQ LDLRRAEIAL
RTAEANRAAY TRQAAKDRNA LVLLLGQPLT PELSRQLDEA VALPDDIVPT DLPSGLPSEL
LARRPDIRAA EQMLIGANAN IGAARAAFFP TISLTGSAGT ASASLDGLFD SGSRAWSFLP
QITLPIFRGG ALRANLDVAQ VQKRIEIANY EKSIQAAFAE VADGLAGKRT LDEQIRSEQL
LVAASQKAYQ LAEQRFQEGV DDNLTLLDAQ RTQYGAQQTL VRTRLTRLNN LIHLYKALGG
GWTEHTVQSG ATGQPSARSP G
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