| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1143 |
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| Symbol | |
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| ID | 7384575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 1202167 |
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| End bp | 1203282 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643654464 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002552616 |
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| Protein GI | 222110352 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.144704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGCA ACTTCCGTTT CCTAATGACG ACGGCCATGG CGGCTGCATT GGCTCTGGCT
GCTCCCGCGT TCGCTCACGA CGGCCATGAC CACGGCGACG AAGCGCCGGC TGCGTCTTCC
AATGGCCCCC AGCGCCAGCC TGATGGCAGC GTGTTTCTTC CGAAACCGTC GCAACGTCAG
ATCGGTGTAC GCACCCAGCT GATCAAGCAG GAGCCCTTGG CCCGCAGCCA TGAACTGGCT
GGCAAAGTAA TCATGGACCC GACGACAGGC GGCAAGGTCC AGGCAATGGT AATGGGCCGG
CTGGTGCCCG GGCCGGATGG TCTGCCGCAG ATCGGCCAAT CCGTGCGCAA GGGCCAGGTG
CTGGCTTACA TCGAACCGGC CAGCGGTGTG CTGGAGCGCT CAGGCCAGAT GGCCCAGGTT
GCCGAGCTGC GTGCGGGCCA AGCGCTCGCG CAGAAGCGCT TGGCCCGGCT GCGCGAGCTG
TCGGAGACCG TGCCCCGCAA GGAGATCGAA GCAGCCGAAA GCGAAGTGAA CAGCCTGACC
GAACGCGCCC GCGCCTTGAG CGGGGGCCTC GCCGGCAGGG ACGTACTGAA GGCCCCAGTC
AGCGGCGTCA TCGCATCCAG CCCCGCAGTT GCCGGGCAGG TCGTGGATGC GCGCGAACTG
GTGTTTGAGG TGGTCGATCC GACCCAACTG CGCATCGAGG CGCTTGCCTA CGATCCGGCA
ATGGCACAGA ACCTGGCCGG TGCTGCACTC GCAGTAGGCG GTCAGAAGGT GCCGCTGAGC
TTCGTCGGTG CCGCCAGCAG CCTGCGCGAG CAGGCCCTGC CCATGCTGTT CAAGGGCACC
AGCGAAAGCC TCTCGCGCTT GGCGGTCGGT ATGCCGGTGG TGGTCTTCGT GCAAGAGGCG
ACGACGGTAC CTGGCTACCG CGTGCCTTCC GGTGCGCTGA TGAAGAACCC TGCCAACCAG
AACATCGTCT GGGTCAAAGA CCAGGCCGAG CGCTTCGAGC CGCGTGTCGT GAACATCACT
CCTTTGGATG GTGCATCCAT CGCTGTCACT TCGGGCCTGG CGGACGGCGA CCGCGTGGTT
GTCGAGGGCG CGTCCCTGAT CAATCAAGTT CGTTGA
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| Protein sequence | MKRNFRFLMT TAMAAALALA APAFAHDGHD HGDEAPAASS NGPQRQPDGS VFLPKPSQRQ
IGVRTQLIKQ EPLARSHELA GKVIMDPTTG GKVQAMVMGR LVPGPDGLPQ IGQSVRKGQV
LAYIEPASGV LERSGQMAQV AELRAGQALA QKRLARLREL SETVPRKEIE AAESEVNSLT
ERARALSGGL AGRDVLKAPV SGVIASSPAV AGQVVDAREL VFEVVDPTQL RIEALAYDPA
MAQNLAGAAL AVGGQKVPLS FVGAASSLRE QALPMLFKGT SESLSRLAVG MPVVVFVQEA
TTVPGYRVPS GALMKNPANQ NIVWVKDQAE RFEPRVVNIT PLDGASIAVT SGLADGDRVV
VEGASLINQV R
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