| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1142 |
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| Symbol | |
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| ID | 7384574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 1199007 |
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| End bp | 1202153 |
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| Gene Length | 3147 bp |
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| Protein Length | 1048 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643654463 |
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| Product | heavy metal efflux pump, CzcA family |
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| Protein accession | YP_002552615 |
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| Protein GI | 222110351 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0325102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAAGT GGCTTCTCGA AAATAGCTTA CGAAACCGGC TCCTGGTCAT CATCGGGGCG
CTGGTGCTGA TGGCGTATGG CGCGTTCACC CTGACGCGCA CGCCGGTAGA TGTCTTTCCC
GATCTCAACA AGCCGACCGT CACTCTCATG ACGGAGGCTG GCGGCATGGC TGCCGAAGAA
GTCGAGCAAC TCATCACGTT CCCGCTCGAA ACGGCCATGA ACGGCCTGCC CAGCGTCGAA
AGCGTGCGCT CGGTCTCCAG CGCCGGGCTT TCCTTCATCT ACGTGACATT TGACTGGAAG
ACCGACATCT TCCGGGCGCG CCAGATGGTC TCCGAACGCC TGACGTCCAT GGAGGAAGGG
CTAGCCCCGG GCGTGACGCC CACTATGGGG CCAATCAGCT CAGTGATGGG CGAGATCATG
CAGATTGCAA TCCCCATCGG TGCCAAGCCC TCAGGGCAGA AGAACGCAGC CCCGCCGCTG
TCGGCCATGG ACACTCGCGA GTACGCGGAC TGGGTGCTAC GCCCCCGGCT GATGGCCATA
CCTGGTGTTG CCCAAGTCAT CCCGATCGGA GGCGAGGTCC GTCAGTTCCA GGTCCAGCCC
AACACCACGC GAATGTCAGA GCTGGGCGTG ACTGCGTCCG ATCTGGATGC GGCTCTCAAG
GGCTTCTCCG CGAACACTTC CGGCGGCTTC CTGGAGATCA ATGGCCGCGA GTACCTGATC
CGCAACCTGG GCCGCACGTC CCGACTCGAC GACCTGCGTA ACCTGCCTCT CGCGGTGCGT
GCGGGCCAAC CCATCCTGCT CCACCAGGTC GCCGATGTTC AGTTTGCGCC AGCCATCAAG
CGCGGCGATG CGGGCTTCGA GGGCCTGCCA GCCGTGATCC TGGGCATCCA AAAGCAGCCC
ACGGCCGATA CGATTGCACT GACCCGCTCG ATCGAGTCAG CGTTGGCGGA CATGAAGGGC
TCACTGCCGG CTGGCATGGC CGAGCCACAG GTGACCTTCC GACAAGCCAA CTTCATCGAG
GCGTCCATCA GCACGCTGCA AGGCAAGCTC ATCGGCGCAT CGGTCTTCGT GGCGGTGATC
CTGTTCTTCT TCCTGGGCAC TTTGCGCCCC CTGGTGATCG CGTTGACCGC GATTCCTGCC
TCGATCTTCG TGACCGGGCT GGTGTTCCAC TATTTCGGCC TATCAATCAA CACCATGACG
CTCGGTGGGC TGGCGATCGC CATCGGCGGT CTCGTGGACG ATGCTGTGGT CGATGTGGAG
AACATCATGC GGCGGCTCAA GGAGGACCGC ACCCGCCACC CTGAGAACCG GCTGACGCCC
CTGGTCATCG TTGCCAGGGC CTCGATGGAG GTTCGCTCGG CGATTCTCTA CGCCACGATG
ATCATTGTGC TGGTGTTCCT GCCCCTGTTC GCGCTGCCGG GGATGGAGGG GCGCTTGTTC
GTGCCGCTGG GCATCGCCTT CATCGTCTCC ACGCTGGCCT CGCTGCTGGT CTCTGTGACG
GTCACTCCGG TGCTTTCGTA CTACCTGCTG CCCAAGATGA GGACGCTGGA CCATGGCGAC
ACTCGGCTTC TAGCCTGGTT GAAGACGCGC TATCAGGGCG GCCTGCAGCG GGTCTTGCAG
CGGCCGCGTG CCGCCCTTGG CATGGCCGCT GTGGCTGTCA CACTGGCTGT CGCCGCGGTG
CCATTCTTCC CGACCACGTT CCTGCCCCCG TTCAATGAAG GAACGTTGCT GGTGGGCCTG
CGCCTGAATC CCGGTGTGAC GCTGGCCGAA TCTTCGGCGC TTGCCCAGCA AGCCGAGCTG
CTGGTCGCGC AGGTGCCAGA GGTGCAGCAC GTGGGCCGGC GCAGCGGACG GGCCGAGCTG
GACGAGCATG CCGAAGGCGT GCATGTCAGC GAGCTGGACG TGGGCCTGCT GCCCGCCTCG
GAGCTAAAGC GCTCCATGGA GGAGATCACC GCCGACATCC GTTCGCGTCT GGCTCACTTG
CCCGGCTCCA TCGGCATTGG CCAGCCGATC TCGCACCGCA TCGACCACAT GTTGTCGGGG
GTGCGCTCGC AGATCGCCAT CAAGGTGTTC GGCGAGGACC TGGACGTCCT GCGCGGGCAG
GCGGATCTGC TGCGCGCCAA GCTGGCCGGA ATTCCGGGGC TTGCTGACCT GGAGATCGAA
AAGCAGGTCC TAGCGCCGCA GATCAAAATC CGCGTGGATT ATGCGGCGGC GGGACGCTAC
GGCGTGGCCG CACCGCAAAT TCTGTCCACG CTGCAAAGCC TGGTCGAAGG CGAAAAGATC
ACCGAGGTCA TCGAGGGCAA CCGCCGCTTC GCGCTGGTGG TTCGCCTGCC CGAGCAGGCG
CGGTCGATTG AGGGCTTGAG CCGCATCCTC ATCGACACGC CCATGGGTCG GGTCCCGTTG
TCGCGCCTTG CCACCATCGA AGACAGCGAC GGCCCCAACC AGGTCAGCCG CGACGATGGC
CGTCGACGCA TAGTTTTGTC GGCCAACGCT CAGGGACGGC CGCTGTCCGA AGTAGTGGCC
GACATACGCA GCGTCGTCCA AGAAGTGCGC TTGCCCGAAG GCTACTTCAT CACGCTGGGC
GGCCAGTTCC AGGCACAAGA GGAAGCCTCG CGACTGGTGG GCCTGCTGTC CATCGTCTCC
CTGACGCTCA TGTTCGTGGT GTTGTACACG CGCTACAAGT CGGTCGTCCT ATCAGCGCTC
ATCATGGTGA ACATTCCATT GGCCCTGGTC GGCGCCGTGT TGGGGCTGTG GCTGTCTGGC
CAGCCGTTGT CCGTGGCCGC CCTGGTCGGC TTCATCACGC TCGCGGGTAT TTCTGTGCGC
AACGGCATCC TGAAGGTGAG CCACTACCTC AACCTCATGC GCATGGAGGG CGAGGACTTC
GACCAGAAGA TGATCGTGCG TGGCTCGCTC GAACGGCTTT CCCCGGTTCT GATGACCGCG
CTGGTCACGG CCTTCGCGCT GGCCCCGCTG CTGTTCGAGG CGTCCCGACC CGGTACTGAG
ATCCTGCACC CCGTCGCGGT GGTGATCTTC TCGGGGCTGG TCAGCTCCAC GCTGCTAGAC
ACCTTCCTTA CACCCGCCAT GTTCTGGCTG TTCGGCCGCA AGCCTGCCGA ACGCCTGCTG
GACGACCGCG ACGCGGAGGC ATTCTGA
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| Protein sequence | MFKWLLENSL RNRLLVIIGA LVLMAYGAFT LTRTPVDVFP DLNKPTVTLM TEAGGMAAEE
VEQLITFPLE TAMNGLPSVE SVRSVSSAGL SFIYVTFDWK TDIFRARQMV SERLTSMEEG
LAPGVTPTMG PISSVMGEIM QIAIPIGAKP SGQKNAAPPL SAMDTREYAD WVLRPRLMAI
PGVAQVIPIG GEVRQFQVQP NTTRMSELGV TASDLDAALK GFSANTSGGF LEINGREYLI
RNLGRTSRLD DLRNLPLAVR AGQPILLHQV ADVQFAPAIK RGDAGFEGLP AVILGIQKQP
TADTIALTRS IESALADMKG SLPAGMAEPQ VTFRQANFIE ASISTLQGKL IGASVFVAVI
LFFFLGTLRP LVIALTAIPA SIFVTGLVFH YFGLSINTMT LGGLAIAIGG LVDDAVVDVE
NIMRRLKEDR TRHPENRLTP LVIVARASME VRSAILYATM IIVLVFLPLF ALPGMEGRLF
VPLGIAFIVS TLASLLVSVT VTPVLSYYLL PKMRTLDHGD TRLLAWLKTR YQGGLQRVLQ
RPRAALGMAA VAVTLAVAAV PFFPTTFLPP FNEGTLLVGL RLNPGVTLAE SSALAQQAEL
LVAQVPEVQH VGRRSGRAEL DEHAEGVHVS ELDVGLLPAS ELKRSMEEIT ADIRSRLAHL
PGSIGIGQPI SHRIDHMLSG VRSQIAIKVF GEDLDVLRGQ ADLLRAKLAG IPGLADLEIE
KQVLAPQIKI RVDYAAAGRY GVAAPQILST LQSLVEGEKI TEVIEGNRRF ALVVRLPEQA
RSIEGLSRIL IDTPMGRVPL SRLATIEDSD GPNQVSRDDG RRRIVLSANA QGRPLSEVVA
DIRSVVQEVR LPEGYFITLG GQFQAQEEAS RLVGLLSIVS LTLMFVVLYT RYKSVVLSAL
IMVNIPLALV GAVLGLWLSG QPLSVAALVG FITLAGISVR NGILKVSHYL NLMRMEGEDF
DQKMIVRGSL ERLSPVLMTA LVTAFALAPL LFEASRPGTE ILHPVAVVIF SGLVSSTLLD
TFLTPAMFWL FGRKPAERLL DDRDAEAF
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