| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1125 |
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| Symbol | |
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| ID | 7384553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 1179084 |
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| End bp | 1180337 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643654446 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002552602 |
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| Protein GI | 222110338 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0255605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCACC CTGTCGCACA GCGCGCCGCG GGCCTGCCGG GCCCGTCTTC ATTGCAACCC
CGCCGCGGGG TTTTTTTGTG GCCGCCGCGT GGCGGCGTGG CGGGTGCTGC ACTGGTGCTG
GCCGTGGCTG CCTTGGCGCT GGCGGGATGT TCGCGCCGCG AGCCGGCGCC AGAGCCGGTG
CGCGCGGTGA AACTGCTCAC CGTGGGCGTG GCGCCCCTGC AGATGCATCT GGAGTACGCG
GGCGAGGTGC GCGCGCGCGT GGAGTCGCGC CTGGGTTTTC GCGTGGCCGG CAAGATCGTG
CAGCGCCAGG CCGAGCTGGG CCAGCGCGTG CAGGCCGGCC AGGTGTTGGC GCAGCTGGAT
CCGCGCGACT ATGAGCTGGC TGCGCAGGCC GCGCGCGCCC AGGTGGCGTC CGCCACCACG
CAGCGTGATT TGGCCGCGGC GGATTTCGAG CGCTTTTCCA AGCTGCGCGC GCAGAACTTC
ATCAGCGGGG CGGAGCTGGA CCGCCGCCAG GCTCAGCTGA AGGCCGCGCA GGCTTCGCTG
GACCAGGCGC GCGCGCAGCT CGCTTCCCAG GGCAACCAGA CCGAGTACAC ACGCCTGGTG
GCGGATGCGC CGGGGGTGGT GACGTCGGTT GACGCCGAGC CCGGCCAGGT GGTGTCTGCG
GGCACGCCGG TGGTGCGCAT TGCTCGCGAC GGCCCGCGCG ACGCGGTGTT CTCGGTGCCG
GAGGACAAGG TGGGCCAGTT GCGCGTAGGG CAGGCCGTGC AGGTGCGCGC CTGGTCGGGC
GACGCGCTGC TGCAGGGCCG GGTGCGCGAG GTGGCGGCCA GCGCCGATCC GGTGACGCGC
ACCTTCCTCG TGAAAGTGGC GGTGGAGGGC GCGGACGTGC CGCCGCTGGG CGCCACCGTG
TATGTGGCGC CGCAGGTGCT GGCGCGGGGC GGTGTGCAGG CGATCAAGCT GCCCACCAGC
GCCCTGCGCC AGGAGGGCGG CCAGACGGTG GTGTGGGTCT ATGAGGCCAA GGACGGCAGT
GCCACCGGCA CCGTGCGCCT GCAGCCGGTG CAGATCGCCA CGGCCGACGG CAACGAGGCC
GTGATCGCCG CCGGCCTCAC CCCCGGCATG CAGGTGGTGG CCACGGGTGT GCATGTGCTG
GCTCCGGGAC AGGTGGTGAC GGTTTACAAG CCAAAAACGG CTCCAACGCC CGAAGGACAA
GCGCTACCAG CTATTAATAA TGAAGCGCCA GCGGCCTCCG CTGCCGCTCG CTGA
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| Protein sequence | MTHPVAQRAA GLPGPSSLQP RRGVFLWPPR GGVAGAALVL AVAALALAGC SRREPAPEPV
RAVKLLTVGV APLQMHLEYA GEVRARVESR LGFRVAGKIV QRQAELGQRV QAGQVLAQLD
PRDYELAAQA ARAQVASATT QRDLAAADFE RFSKLRAQNF ISGAELDRRQ AQLKAAQASL
DQARAQLASQ GNQTEYTRLV ADAPGVVTSV DAEPGQVVSA GTPVVRIARD GPRDAVFSVP
EDKVGQLRVG QAVQVRAWSG DALLQGRVRE VAASADPVTR TFLVKVAVEG ADVPPLGATV
YVAPQVLARG GVQAIKLPTS ALRQEGGQTV VWVYEAKDGS ATGTVRLQPV QIATADGNEA
VIAAGLTPGM QVVATGVHVL APGQVVTVYK PKTAPTPEGQ ALPAINNEAP AASAAAR
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