| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1120 |
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| Symbol | |
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| ID | 7382935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 1173670 |
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| End bp | 1174938 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 643654441 |
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| Product | squalene-associated FAD-dependent desaturase |
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| Protein accession | YP_002552597 |
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| Protein GI | 222110333 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2907] Predicted NAD/FAD-binding protein |
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| TIGRFAM ID | [TIGR03467] squalene-associated FAD-dependent desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.454747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGCGG CCGTGCATGC GGCCCAGGCG GGCCACGCGG TCAGCGTGTT CGAGGCCAGC
CGCACCCTGG GCGGGCGCGC GCGCGCCGTG GCCGCCCAGC GCGCAGACGG CTCGCCCCTG
GTGCTGGACA ACGGCCAGCA CATCCTCATC GGCGCCTATG CCGAATGCCT GCGCCTGATG
CGCGCCGTGG GCGTCACGCC CGACTCCGCC CTGCTGCGCC TACCCCTGGC GCTGGTGTTC
CCCGACGGCA GCGGCCTGGC CCTGCCCGAT GCCCCGCCGC CCTGGGATGC GCTGGCCGGC
ATCGCCCGCG CACGCGGCTG GAGCCTGCGC GAGCGTGCGG CCCTGCTGGC GCGCGCCGCA
CGCTGGCGGC TGGCGGGGTT TCGGTGTGCA CCGGGCACCA GCGTGGCGGA CTTGTGCGCA
GGCCTGCCGC AGCGGCTGGT GGACGAGTTC ATCGCGCCGC TGTGCGTGTC GGCGTTGAAC
ACGCCCGTGC AAGATTCCTG CGGCCAGGTG TTCCTGCGCG TGCTGCACGA CAGCCTGTTC
GCCGGCCGGG GCGGCTCCCA CCTGCTGCTG CCGCGCACCG ACCTGGGCGC GCTGTTCCCC
GAGCCCGCCG CGCAGTGGCT GCAGCAGCGC GGCCACGCGG TGCACCGCGG CCAACGCGTG
CAGGCACTCG CACGCGACGA GGCCGGCTGG CGCGTGGACG GCTGCGCGTT CGACGCCGTG
CTGCTGGCCA CCAGCAGCAC CGAGTCCGCC CGCCTGGTGG CCGAAGCCGC CGTGCCCGCG
CCCCAGCGTC CCGCCCTGCA GACCTGGGCC GCCGGTGCGC AGGCACTGCG CTTTGGCGCC
ATCGCCACCG TGTATGCCGA ACTGCCGGGA GCGCGCACCC CGCTGCTGCC CCGCCCCATG
CTGGCGCTGC GCGCGCGCGC GCAACGGCCC GCGCAGTTCG TCTTCGACCG CGCACTGCTG
GGTGGCCCGG CCGGGCTGCT GGCGTTCGTG GTCAGCGCCT TCGAGGGCGA GCGCGCCGCG
CTGGAGCGCG ACGTGCTGGC CCAGGCGGCC GAGGACCTGG CCCTGCCCGG CCTGCGCGCG
GTGCAGACGG TGGTGGAAAA GCGCGCCACC TTTGCCTGCA CGCCCGCCCT GGCGCGCCCG
CCGCGCGTGA TTGCGCCCGG CCTGCAGGCC TGCGGCGACT ACGTGGCAGG GCCCTACCCC
GCCACGTTGG AGGGCGCGGT ACTGCACGGC GCGGCGGCCG CGCAGGATTT AGGCCAAAGC
AGCCTCTAG
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| Protein sequence | MAAAVHAAQA GHAVSVFEAS RTLGGRARAV AAQRADGSPL VLDNGQHILI GAYAECLRLM
RAVGVTPDSA LLRLPLALVF PDGSGLALPD APPPWDALAG IARARGWSLR ERAALLARAA
RWRLAGFRCA PGTSVADLCA GLPQRLVDEF IAPLCVSALN TPVQDSCGQV FLRVLHDSLF
AGRGGSHLLL PRTDLGALFP EPAAQWLQQR GHAVHRGQRV QALARDEAGW RVDGCAFDAV
LLATSSTESA RLVAEAAVPA PQRPALQTWA AGAQALRFGA IATVYAELPG ARTPLLPRPM
LALRARAQRP AQFVFDRALL GGPAGLLAFV VSAFEGERAA LERDVLAQAA EDLALPGLRA
VQTVVEKRAT FACTPALARP PRVIAPGLQA CGDYVAGPYP ATLEGAVLHG AAAAQDLGQS
SL
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