Gene Dtpsy_1119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_1119 
Symbol 
ID7382934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp1172356 
End bp1173645 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content70% 
IMG OID643654440 
Productribonuclease BN 
Protein accessionYP_002552596 
Protein GI222110332 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.695932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTTGT CCCTACAGTC CATTGCAGTG CGTGCCGAGG AGTGGCTGGT GGAGCTTTCC 
CACTTCCCCT GGCGCACCAC CGCGCAGACG CTGCGCGAGC GCTTTCGCGA GGACCGCCTG
GGGCTGACGG CCAGCAGCCT CACTTTCACC ACGCTGCTGG CGCTGGTGCC GTTCGTGACG
GTGGCGCTGG CCATGTTCAC CGTGTTCCCC ATGTTTGCCG AGATGCAGCT CGTGCTGCAG
CGCTGGCTGG TGGACAGCCT GGTGCCCGAC AGCATCTCGC GCCCCGTGCT GGGCTACCTC
ACGCAGTTCG CCGCCAAGGC GCATGGCCTG GGCGCGGCGG GCTTGTCGAT CCTCATGGTG
ACGGCGCTGG CGCTGATCCT CACCATCGAC CGCACGCTCA ACAACATCTG GCGCGTGCAG
CGCCTGCGCC CGCTGGGCCA GCGTGTGCTG ATCTACTGGG CCGCGCTCAC GCTCGGTCCG
CTGGTGCTGG CGGCCAGCCT GGCGCTGACC ACCTCGGTCG CCAGCGCCGC GTCGCGCGGT
ATCGGCGACA CGTTGCCGGG CGGAGCGCGC CTGCTGTTCG ATGCGATCGA GTTCTTCGTG
CTGGCCGCCG GCATGGCGGC GCTGTACCGC TATGTGCCCA ACACCCAGGT GCACTGGCGC
CACGCCTGGG CGGGCGGAGT GTTCGTCGCC GTGGGCATCG AGCTGGCCAA GAAAGTGCTG
TCGCTGTACC TGGCGTCGGT ACCCACCTAT TCGGTGCTGT ACGGCACGTT CGCCACGCTG
CCCATCTTGC TGCTGTGGGT GTATGTGGCC TGGGTCATCG TGCTGCTGGG TGCGGTGGTG
GCCGCCTATC TGCCGAGCCT GCTTGCCGGC GTGGCGCGCT GCGCCACGGG CGAGGGCTGG
GCCTTCTTGC TGGCCGTGGA GGTGCTGCAG CAGCTGCACC GCGCGCGCCA GCAACCGCCC
CACGGGCTGA GCGTGCTGGA GCTGGCCCAG CGGCTGCGCG TGGATGTGCT GCAGGTGGGG
TCCGTGCTGC CGGTGCTGGC GGCGCTGGAT TGGGTGGTGC GGGTGGACGA GACGGCCGCC
GACGGGTCCG ACGCAGCCGA CGCACGCTAC GTGCTGCTGG CCGAGCCGGC CACCACGCAC
ATGGAGCCCC TGGTGCAGCG CCTGCTGCTG GCGCGCACCC CGCCGCTGGA GCGCCTGTGG
GCGCACACGG GGCTGGAGGT GCTCACGCTG GCCGACGTGC TGCCGCGCGA ATCCGCGCAG
CGGCCGCCTG AGATGCTCCT TAAACGATAG
 
Protein sequence
MSLSLQSIAV RAEEWLVELS HFPWRTTAQT LRERFREDRL GLTASSLTFT TLLALVPFVT 
VALAMFTVFP MFAEMQLVLQ RWLVDSLVPD SISRPVLGYL TQFAAKAHGL GAAGLSILMV
TALALILTID RTLNNIWRVQ RLRPLGQRVL IYWAALTLGP LVLAASLALT TSVASAASRG
IGDTLPGGAR LLFDAIEFFV LAAGMAALYR YVPNTQVHWR HAWAGGVFVA VGIELAKKVL
SLYLASVPTY SVLYGTFATL PILLLWVYVA WVIVLLGAVV AAYLPSLLAG VARCATGEGW
AFLLAVEVLQ QLHRARQQPP HGLSVLELAQ RLRVDVLQVG SVLPVLAALD WVVRVDETAA
DGSDAADARY VLLAEPATTH MEPLVQRLLL ARTPPLERLW AHTGLEVLTL ADVLPRESAQ
RPPEMLLKR