| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1113 |
|---|
| Symbol | |
|---|
| ID | 7382928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 1167214 |
|---|
| End bp | 1168167 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643654434 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002552590 |
|---|
| Protein GI | 222110326 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02284] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGATT TCAAGGATGC CAATCGTGAC CCCCTGACCA ACGAACCGGG GGCCCACCCC
ATCGGCACGG GCGTAGGCGC CGCGGGCGGA GCCGTTGCGG GCGCCGCCAC GGGCGCTATC
GGCGGCCCCA TCGGTGCTGC CGTGGGCGGT GTGGCGGGAG CCGTTGTCGG CGGTCTGGCC
GGCAAGGCGG CGGCCGAGGC GGTCAACCCT ACGGCCGAGG ACGCCTACTG GCGTGAAACC
TACCAGCGCG AACCGTACTA CGTGACCGGC CGGGCCTACG AAGAATACCG CCCCGCCTAT
GAGATGGGCT GGAGTGCCGC CAGCCGCTAC CCCGGTGATT TTGAAACGGT GGAGCCCGAA
CTGTCGCGCG ACTGGGGCCG CGCCCGGGCC CAAAGCTCGC TGGAATGGGC GCAGGCCCAG
CCCGCCGCGC GCGCCGCGTG GGATCGCGTG CGCCGTAACC CCACGGTGAC CGCGTCGGGC
ACCGCGGCAG GCGCCACGCT GATGGACAAC GAGGACGTAG TGGACGTGCT GGACGATTTG
CTGGAATGCA GCCGCGACGG CGAGTACGGG TTTCGCACCT CGGCCGAGCG TGCGGAATCG
CCCGAACTCA AGAGCTTGCT GGAGCGCCGC GCCCAGGAAT GCGCAACCGC CGCCACGGAG
CTGGAGAGCG CGATCCGCAG CCACGGCGGC GAGCCCTCCA GCGGCGGCAC CATGGCCGGC
GCGCTGCACC GCGGTTGGGT GTCGGTGAAG GCGGCGCTGA GTACCTATGA CGACAAGGCC
GTGCTGGAAG AGTGCGAGCG CGGCGAGGAC GTGGCCGTGG CCCGCTATAA CAAGGCGCTG
GAGAACGCAC TGCCACCCGC CGTGCGCACC CTGGTCGAGC GCCAGGCCCA GGGCGTGAAG
CGCAACCACA ACGAAGTGCG CGCGCTGCGC AACCGTTACC AGGCCGCGTC CTGA
|
|---|
| Protein sequence | MSDFKDANRD PLTNEPGAHP IGTGVGAAGG AVAGAATGAI GGPIGAAVGG VAGAVVGGLA
GKAAAEAVNP TAEDAYWRET YQREPYYVTG RAYEEYRPAY EMGWSAASRY PGDFETVEPE
LSRDWGRARA QSSLEWAQAQ PAARAAWDRV RRNPTVTASG TAAGATLMDN EDVVDVLDDL
LECSRDGEYG FRTSAERAES PELKSLLERR AQECATAATE LESAIRSHGG EPSSGGTMAG
ALHRGWVSVK AALSTYDDKA VLEECERGED VAVARYNKAL ENALPPAVRT LVERQAQGVK
RNHNEVRALR NRYQAAS
|
|---|
| |