| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1106 |
|---|
| Symbol | |
|---|
| ID | 7382921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 1159323 |
|---|
| End bp | 1160321 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643654427 |
|---|
| Product | fatty acid hydroxylase |
|---|
| Protein accession | YP_002552583 |
|---|
| Protein GI | 222110319 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3000] Sterol desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGGGC TGACCTATTT ATTCGATACC GCGCAGCAAT GGCTGTTCGA GACGCTGGTA
CAGCCCGCGC TCTTCATGCT GGGCCAGGCC AATGTGCTGG AGGACGGTTA TGCCGCCACC
GGATGGCTGC TGGTGGGACT GCTGCAACTG GGGGTGATGG TCGCGGTGAT CGGGCCTTTG
GAGCGCTGGC GCCCGGTGGA GCCGTTGCGC GACCGTGGTG CCGTGCACGT GGACATGCTT
TACACGCTGA TCCATCGCCT GGGTCTTTTT CGCCTGGCAC TGTTCTTCAC CACGGAGCCT
CTGTGGAATG CACTGTTTGG CGCCCTGCGC GCCCATGGCT GGAAGACCCT GCAGCTGGAT
GCGCTCTGGC CGGGTGTCTC CGACTTGCCC GTCGTGAGCC TGCTGCTGTA CCTGCTGGTG
TTCGACTTCG TGGACTATGG GATCCACCGC GGCCAGCACC GCTTTGAATG GTGGTGGAGG
CTGCATGCGC TCCACCATTC GCAGCGACAG ATGACGATGT GGAGCGACAA CCGCAACCAT
CTGCTGGACG ATCTGCTGCG CGATGCCATC ATCGTGTTCG TCGCGCAGTG CATTGGTGTG
GCGCCGGGGC AGTTTGTCGC CATCGTGGCC CTCACGCAGC TCAGCGAGAA CCTGCACCAC
GCCAACCTGC GCCTGTGGTT CGGCCAGGTG GGCGAGCGCC TGTGGGTCAG CCCGCGTTTC
CACCGCATGC ACCACGCCAT GGGCCTGGGC CCTGAAGCTA CACCTGGGCA GGGAACCCAT
CAGCACCCGC ATGCGGCAGT GCCGGGGGGC AACAACTTCG GCGTGTTGTT GCCGTGGTGG
GACATGTTGT TCGGTACGGC CAACTTCGAG CACCGCTACG AGCCCACGGG CGTGCGCGAC
CAGGTGGAGG CGGACGCGGA CGGCCGCGTG CGTGATTACG GGCGGGGGTT CTGGGCGCAG
CAGTGGCGCG GCCTGCTGCG GCTGGTGGGG CGGGCGTAG
|
|---|
| Protein sequence | MSGLTYLFDT AQQWLFETLV QPALFMLGQA NVLEDGYAAT GWLLVGLLQL GVMVAVIGPL
ERWRPVEPLR DRGAVHVDML YTLIHRLGLF RLALFFTTEP LWNALFGALR AHGWKTLQLD
ALWPGVSDLP VVSLLLYLLV FDFVDYGIHR GQHRFEWWWR LHALHHSQRQ MTMWSDNRNH
LLDDLLRDAI IVFVAQCIGV APGQFVAIVA LTQLSENLHH ANLRLWFGQV GERLWVSPRF
HRMHHAMGLG PEATPGQGTH QHPHAAVPGG NNFGVLLPWW DMLFGTANFE HRYEPTGVRD
QVEADADGRV RDYGRGFWAQ QWRGLLRLVG RA
|
|---|
| |