| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1093 |
|---|
| Symbol | |
|---|
| ID | 7382902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 1140985 |
|---|
| End bp | 1142112 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643654408 |
|---|
| Product | outer membrane assembly lipoprotein YfgL |
|---|
| Protein accession | YP_002552570 |
|---|
| Protein GI | 222110306 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1520] FOG: WD40-like repeat |
|---|
| TIGRFAM ID | [TIGR03300] outer membrane assembly lipoprotein YfgL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGCGC TGACCGGCGC CTCTTTGCTG GTGAGCCTGC TGGTGATGGG AGGGTGCTCG
TTGTGGGGCG GCACGCCGAA GCCGAAGCCG GCGGAGCTCG GCCCCAACGT CCCTGTGCTG
GGAGTGCGTC AGGCGTGGGT GTCCCAGATT GGGACGCAAG AAGGCCTTGA GCTCGACATG
CACGTGGAGG GCAGCGTGGT GACGGTGGCC TCTGCCAATG GCGATGTGGC GGCCATCGAT
GCACGCACGG GGGGCGACGT ATGGCGCACG CGCCTCAACC AGCCGCTTGC CTCGGGCGTG
GGAAGTGATG GGCGCTGGAC GGCGGTGGTG TCGAAGGGCA ACCAAGTTAT CGCACTGGAC
GGCGGTCGGG AGATCTGGCG CAAGCCGTTG CCCGCCCAGG CTTATACGGC GCCGTTGGTC
GCGGGCAAGC GCATCTTCGT GCTGGCGGCG GATCGCTCCA TTTCCGCCTT CGACGCGGCG
ACTGGCTACC GGCTCTGGAG CCAGCAGCGG CCGGGTGAGC CCCTGGTCCT GCGCCAGGGC
GGTGTGCTGA TGGCCGTGGG TGACACCCTG GTCGCGGGGC TGTCCGGCCG TCTGGTCGGC
TTCAATCCCG ACAACGGCGT GGTGCGCTGG GAGGCGCCCT TGGCCAGCCC GCGCGGCACC
AATGACGTCG AGCGGCTGGT GGAGATCGTT GGCCGTACGA GCCGTGTGGG CGACAGCCTG
TGCGCGCGGG CTTTTCAGGC CTCGGTGGGC TGTATCGATG CATCCCGGGG GGCGGTTTCG
TGGACGCAGC CCGCCAGCGG CGGCGTGGGC ATCCACGGGG ATGACACCAT GCTGTTCGGA
ACGGAAAGCA ACGGAACAGT GATTGCATGG CGACGCACTG ATGGGTCCCG CGCCTGGACA
TCGGACAGGT TGCAGTTCCG CAAGCTCACA GCGCCCTTGG TGCTGGGGCG TTCAGTGGTA
GTGGGTGACG ATACAGGGCT GGTGCACCTG CTGTCCCGTG AGGACGCCGC ACCGCTCAAC
CGCCTGACGA CCGATGGCTC GGCCATTGCG GCGGCCCCGG CGGTGGCGGG CGACACCTTG
GTGGTGGTGA CGCGCAAGGG CGGCGTCTAC GGCTTCCGTC CGGACTGA
|
|---|
| Protein sequence | MRALTGASLL VSLLVMGGCS LWGGTPKPKP AELGPNVPVL GVRQAWVSQI GTQEGLELDM
HVEGSVVTVA SANGDVAAID ARTGGDVWRT RLNQPLASGV GSDGRWTAVV SKGNQVIALD
GGREIWRKPL PAQAYTAPLV AGKRIFVLAA DRSISAFDAA TGYRLWSQQR PGEPLVLRQG
GVLMAVGDTL VAGLSGRLVG FNPDNGVVRW EAPLASPRGT NDVERLVEIV GRTSRVGDSL
CARAFQASVG CIDASRGAVS WTQPASGGVG IHGDDTMLFG TESNGTVIAW RRTDGSRAWT
SDRLQFRKLT APLVLGRSVV VGDDTGLVHL LSREDAAPLN RLTTDGSAIA AAPAVAGDTL
VVVTRKGGVY GFRPD
|
|---|
| |