| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1088 |
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| Symbol | |
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| ID | 7382897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 1135820 |
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| End bp | 1136647 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643654403 |
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| Product | type IV pilus biogenesis/stability protein PilW |
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| Protein accession | YP_002552565 |
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| Protein GI | 222110301 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR02521] type IV pilus biogenesis/stability protein PilW |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.756407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAAGT GGCGGATCAA TCATGGCGGG TGGCAGGCGA TGGCGGCGAT CGGCATTGCC
GTTGTCGTCT CGGGCCTTGC CGGTTGTGCC CACCAAGGGG CGTCCGATGC CAATGGTGCC
GTGGCGGAAT CCGCGTCCGG CGGCGGCGAA GCCGACGTGC GTCGCCGTGC ACGTATCCGG
CTGGAGCTGG CTGCGAACTA CCTGCAAATG GGGCAGACCA CCGTGGCCAT GGAGGAGGTG
CGGCAGGCGA TCACGACCGA TCCCACGTAT GCCGACGCCT ACCACCTTCG CGGCTTGATA
TACATGAATA TGGGCGACCT GGCGCTCGCG GAAGACAGCC TCAAGCGCGC CCAAGGCATG
AAGCCTTCCG ATCCAGACAT CATGCACAAC TATGGCTGGC TGCAGTGCCA GCGCCAGCAG
TACGACGTCG CCAATCAGAT GTTCGAGCGG GCGCTTGCCG TGCCGAGTTA CAAGGCACGC
AGCAAGACGC TGATGTCCCA GGGCCTGTGC TACCAGCGGG CGGGGCGTCT TGCAGAGGCC
GAACAAGCGC TGAAGCAGGC CTATGAGATT GATGCGGGCA ACCCGGCGGT GGGGTACCAC
TTGGCGGCCG TGCTGTTTGC GCGGGGCGAG GCCAAGCGGG CGCAGTTTTA TGTCCGTCGC
GTGAACAATG GCGAGTATGC CAATGCCGAG TCTCTGTGGT TGGGCGTGAA GATCGAACGC
GTGCTCAAGG AGTTCGTGGC CATGCGCCAG TTGGGTGATC AATTGCGCAA GCGCTTCCCC
AACGCAAAAG AAACCCTGGC ATTCGAACGA GGGGCCTTCG ATGAGTGA
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| Protein sequence | MAKWRINHGG WQAMAAIGIA VVVSGLAGCA HQGASDANGA VAESASGGGE ADVRRRARIR
LELAANYLQM GQTTVAMEEV RQAITTDPTY ADAYHLRGLI YMNMGDLALA EDSLKRAQGM
KPSDPDIMHN YGWLQCQRQQ YDVANQMFER ALAVPSYKAR SKTLMSQGLC YQRAGRLAEA
EQALKQAYEI DAGNPAVGYH LAAVLFARGE AKRAQFYVRR VNNGEYANAE SLWLGVKIER
VLKEFVAMRQ LGDQLRKRFP NAKETLAFER GAFDE
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