| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1087 |
|---|
| Symbol | |
|---|
| ID | 7382896 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 1134637 |
|---|
| End bp | 1135788 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643654402 |
|---|
| Product | radical SAM enzyme, Cfr family |
|---|
| Protein accession | YP_002552564 |
|---|
| Protein GI | 222110300 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
|---|
| TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.486861 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGGCGT GGACATCCGT GAACGTTATG ACCACGAACC TTCTGGATTT TGACCTGGAC
GGCCTGGCTG CTTTTTGCGA GCGGCTGGGA GAAAAACGTT TTCGGGCCAC GCAACTGTTT
CGCTGGATCC ACCAGCGCGG TGCCAGCGAT TTTGACCAGA TGAGCGACCT GGCGAAATCG
TTGCGCGAGA AGCTCAGGGG CTGCGCCCAT GTGGCAGGGC TGCAAGCCAT CAGCGAACAT
GTCTCTGCGG ACGGCACGGT GAAGTGGCTG TTCGACGTGG GTGACGGCAA CGCCGTGGAG
ACAGTCTTTA TTCCTGAGGA CGATCGCGGC ACCTTGTGCA TCTCCTCGCA GGCTGGATGC
GCCGTAGGCT GCCGTTTTTG CTCCACCGGT CACCAGGGGT TCAGCCGTAA TCTCACTACT
GGCGAAATCC TGGCCCAGCT CTGGTATGCC GAGCACGCAC TACGGCAGCG CCGCGGTGAC
GGCGAACGCG TGATTTCCAA CGTGGTGATG ATGGGAATGG GCGAGCCGCT GCAGAACTAT
GCTGCACTGG TGCCTGCGCT GCGTGTCATG CTCGATGACC ATGGTTACGG CTTGTCGCGG
CGTCGCGTAA CCGTGTCTAC CTCAGGCGTC GTGCCCATGA TGGACCGCCT GGCGCAGGAT
TGTCCTGTGG CGCTCGCTGT TTCGCTGCAT GCTCCCAATG ACGTGTTGCG CGACAACCTC
GTTCCCCTGA ACCGCAAGTA CCCGCTGCAT GAACTCCTGG CGGCGTGTCG GCGTTACTTG
GACCACGCAC CGCGGGACTT CATCACTTTT GAATACTGCA TGCTGGAAGG CGTGAACGAT
CAGCCAGAGC ATGCGCGACA GTTGATTGAC CTGGTGGGCC GCAAGGCGGC CGACGGCGGG
GTGTCGTGCA AGTTCAATCT CATCCCCTTC AACCCGTTCC CGGCTTCCGG TCTGCGCCGA
TCTCCCCCGG CGGCTGTGAC GGCTTTCGCA CAATTGTTGA GTGACGCGGG TATCGTCACG
ACCGTTCGCA AGACGCGCGG TGACGATATT GATGCGGCAT GCGGACAACT GGCTGGCGAT
GTGAAGGACC GAACACGGGT CAATGAACGC ATGGCCAAGC TCAGGACCAT CGAGATCAAG
CCGGTCATCT GA
|
|---|
| Protein sequence | MWAWTSVNVM TTNLLDFDLD GLAAFCERLG EKRFRATQLF RWIHQRGASD FDQMSDLAKS
LREKLRGCAH VAGLQAISEH VSADGTVKWL FDVGDGNAVE TVFIPEDDRG TLCISSQAGC
AVGCRFCSTG HQGFSRNLTT GEILAQLWYA EHALRQRRGD GERVISNVVM MGMGEPLQNY
AALVPALRVM LDDHGYGLSR RRVTVSTSGV VPMMDRLAQD CPVALAVSLH APNDVLRDNL
VPLNRKYPLH ELLAACRRYL DHAPRDFITF EYCMLEGVND QPEHARQLID LVGRKAADGG
VSCKFNLIPF NPFPASGLRR SPPAAVTAFA QLLSDAGIVT TVRKTRGDDI DAACGQLAGD
VKDRTRVNER MAKLRTIEIK PVI
|
|---|
| |