| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1078 |
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| Symbol | |
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| ID | 7382887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 1125663 |
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| End bp | 1127186 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643654393 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002552555 |
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| Protein GI | 222110291 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.329883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTCCG CCAAATCCCC TTCTGAAATT GCCCGCGAGA CGCTCAAGCT ACTCGCCACG
CGCCGGCTTC CTCCCACGCC CGACCACTAC CAGGCCCTCT ATGACGAAGT GGCCGGCACC
ACCAGCGCGC CGGCGTTTCC CAGCGCCCAG CTGCGGCAGA TCTCGCGGGT GATCCCCGGC
CAGACCCCGG CGCAGAAGCG GTTGCTGGGC CTGTTGGAAA CCGCCATCAC CCAGCAGGAC
TGGGGCGTTT TGCAAAACGT GTTGGTGGGA TACGCCAACC TGGGACTCTC GCCCGTGGCT
GCGCCCGAGC CCGCGAGCAC CCGGATTGAC CACCTGCCGC TGACACTGGC GCAGAATCTG
GCGCGGCTGG TGGACAACAC CCTGCCGGCG CTGGGCGAGG ACGATGCCCG CGTGCATGAG
CTGGCTGCGC AATTGAGCAC CTTCCTGCGC GAGCCCGACC CACCCGTCTC CACCGCCGAG
CTGATGCTCG GCAACTTCAG CTACCGCCTG TCTTTCGCGG CGGAAGACCA GGCCGCCATC
CGGCTGAGCT TGCTCAGCCT GCTGCGCCTG GTGTTCGAGA ACATTGCCGC CCTGAGCATG
GACGACGAGT GGCTGCACGG CCAGGCCGAG GCGCTGCTTG CGGCCTCCAC CCCGCCGCTC
ACGCTGCGCC GGCTGGACGA CGTGCAGCGA CGCCTCAAGG ACGTCATCTT CAAGCAGACT
GAGGCCAAGG AACGCACCGT TCACGCCCAG ATGCAGATGC GCGAACTGCT GGCCACATTC
ATCGAGCGCC TGGCGCAGAT GGATGAATCC AGCAGCGCCT ACAACACCAA GATGGAGGAT
TGCGCCGAGC GCATCAGCCA GGCCACGCAA CTGCAGGACA TCATGCCGCT GCTGGAAGAA
GTCATGGCCG CCACGCGCGC CATGGCGCTG AGCAGCCGGG TGACGCGCGG CGAACTGCAG
GAACTACGCG AGCGCACCGA GGCCAAGCAC GCCGAAATCG ACCACCTGCG CCAGGAGCTG
GACCGCGCGA GCGCCCAGGC GCGCCACGAC CCGTTGACGG GCTCGCTCAA CCGCAAGGGC
TTTGCCGAGG CCATGGAGCG CGAGATCGCG CGTGCGCGCC GCCAGGACGC GCCGCTGTGC
GTGGCGCTGC TGGACGTGGA CAACTTCAAG TCCATCAATG ACCGCCTGGG CCACACCGCC
GGCGACGCGG CACTGGTGCA TCTGGCGCAG GTCACCCGCG AGGTGATGCG ACCGCAGGAC
CAGTTGGCGC GCTATGGCGG CGAGGAATTC GTCATCATCC TGCCCGACAC CGAACTGGCG
GAAGGCGTGA AGGCCATGGA GCGCCTGCAA CGCGAGCTGA CCACGCGCTA CTTCCTCAAA
GACCAGGAGC GGGTGCTCAT CACCTTCAGC GCCGGTGTGG CCCAAGTGGA GGGCGAACAA
GGCAGCGCCG ACGCAATCCG CCGCGCCGAC CAGGGCATGT ACCTGGCCAA GCGCACCGGC
AAAAACCGCG TGGTTGCTGC CTGA
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| Protein sequence | MASAKSPSEI ARETLKLLAT RRLPPTPDHY QALYDEVAGT TSAPAFPSAQ LRQISRVIPG
QTPAQKRLLG LLETAITQQD WGVLQNVLVG YANLGLSPVA APEPASTRID HLPLTLAQNL
ARLVDNTLPA LGEDDARVHE LAAQLSTFLR EPDPPVSTAE LMLGNFSYRL SFAAEDQAAI
RLSLLSLLRL VFENIAALSM DDEWLHGQAE ALLAASTPPL TLRRLDDVQR RLKDVIFKQT
EAKERTVHAQ MQMRELLATF IERLAQMDES SSAYNTKMED CAERISQATQ LQDIMPLLEE
VMAATRAMAL SSRVTRGELQ ELRERTEAKH AEIDHLRQEL DRASAQARHD PLTGSLNRKG
FAEAMEREIA RARRQDAPLC VALLDVDNFK SINDRLGHTA GDAALVHLAQ VTREVMRPQD
QLARYGGEEF VIILPDTELA EGVKAMERLQ RELTTRYFLK DQERVLITFS AGVAQVEGEQ
GSADAIRRAD QGMYLAKRTG KNRVVAA
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