Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1040 |
Symbol | |
ID | 7382359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 1081013 |
End bp | 1082110 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643654355 |
Product | tartrate dehydrogenase |
Protein accession | YP_002552517 |
Protein GI | 222110253 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCAAGA CCTATCGCAT TGCCTGCATC CCCGGCGACG GCATCGGCAA GGAGGTAATC CCCGCCGGCC AGGCCGTGCT GGAGGCATTA GCGGCATCCC AGCCGGGCCT GGGCTTTGCG TTCACCAGCT ATGGCTGGGG CGGAGACTGG CATCGCGCGC ACGGCGAGAT GATGCCGGCC GACGGCCTGC AGGCGCTCAG GGACAAGGAC GCCATCCTGT TCGGCTCGGC CGGCGACCCG CATATCCCCG ATCACATCAC GCTGTGGGGC TTACGCCTGA AGATCTGCCA GGGGTTCGAC CAGTACGCCA ACGTGCGCCC CACGCGCATC CTGCCGGGCA TCGATGCGCC GCTCAAGCGT TGCGCGCCCC AGGACCTGGA CTGGGTCATC GTGCGTGAAA ACTCCGAAGG CGAATACGCC GGCGTGGGCG GCCGTGTGCA CCAGGGCCAT CCGCTGGAGG CCGCGACCGA CGTGAGCATG ATGACCCGCG CCGGTGTGGA GCGCATCATG CGCTTTGCGT TCAAACTGGC GCAGTCGCGT CCGCGTAAGC TGCTCACGGT GGTCACCAAG AGCAACGCCC AGCGCCACGC CATGGTGATG TGGGACGAAA TCGCGGTGCA GATCAGCCGC GAATTTCCCG ATGTGCGGTG GGACAAGGAA CTGGTGGACG CGGCGACCGC GCGCATGGTG AACCGCCCCG CATCGCTGGA CACCATCGTC GCCACCAACC TGCATGCCGA CATCCTGAGC GACCTGGCCG CCGCGCTGGC GGGCAGCCTG GGGATAGCGC CCACCGGCAA CATCGATCCC GAGCGCCGCT ACCCCAGTAT GTTTGAGCCC ATCCACGGCT CGGCCTTCGA CATCATGGGC AAGGGCCTGG CCAACCCGGT GGGCACGTTC TGGAGCTGCG TGATGCTGCT GGAGCACCTG GGCGAACACG CCGCCGCGCA GCGCCTGATG CGTGCCGTGG AGCATGTCAC CGCCAACCCT GCGCTGCACA CGGGCGACCT GGGCGGCCAG GCCACCACGC AGCAGGTCAC CGATGCGGTG TGCGCCCAAC TGGCGCAGCC GGTGGGACAG CAGGCAGCGC TGGCCTGA
|
Protein sequence | MSKTYRIACI PGDGIGKEVI PAGQAVLEAL AASQPGLGFA FTSYGWGGDW HRAHGEMMPA DGLQALRDKD AILFGSAGDP HIPDHITLWG LRLKICQGFD QYANVRPTRI LPGIDAPLKR CAPQDLDWVI VRENSEGEYA GVGGRVHQGH PLEAATDVSM MTRAGVERIM RFAFKLAQSR PRKLLTVVTK SNAQRHAMVM WDEIAVQISR EFPDVRWDKE LVDAATARMV NRPASLDTIV ATNLHADILS DLAAALAGSL GIAPTGNIDP ERRYPSMFEP IHGSAFDIMG KGLANPVGTF WSCVMLLEHL GEHAAAQRLM RAVEHVTANP ALHTGDLGGQ ATTQQVTDAV CAQLAQPVGQ QAALA
|
| |