| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1004 |
|---|
| Symbol | |
|---|
| ID | 7382321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 1045422 |
|---|
| End bp | 1046864 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643654319 |
|---|
| Product | cytochrome c oxidase accessory protein CcoG |
|---|
| Protein accession | YP_002552482 |
|---|
| Protein GI | 222110218 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0348] Polyferredoxin |
|---|
| TIGRFAM ID | [TIGR02745] cytochrome c oxidase accessory protein FixG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCAG CCGAAGGTCA GCCCCGTAAG GTGATTCCTA TCACGCCAGT GGGGGCCGAA
AGTTCGCAGA CCGAGGTCAT TTCGCTCTAT GAGGCGCAAA AGAAAATCTA TCCACGCTCG
ATAAGTGGAG TGTTCGCACG TTGGCGTTGG GCGATGGTGT TTCTGACACA GCTGGTTTTC
TATGGCCTGC CATGGCTGGA GTGGGGCCAG CGCCAAATGG TGCTCTTTGA CCTCGGAACA
CGCCGTTTCT ATATTTTTGG TTTGGTGCTT TACCCGCAGG ACTTCATTTA TCTGACGGGT
TTGCTGATTA TTTCCGCGCT GTCGCTTTTT CTGTTTACCG CAGTGGCGGG ACGCCTGTGG
TGCGGCTTCT CCTGTCCCCA GACCGTATAC ACGGAAATGT TCATGTGGAT CGAGCACAAA
GTCGAAGGCG ACCGCAGTGC CCGTATGCGC CTGGACAATG GTCCGTGGAC ATTTGAGAAG
ATCTGGAAAA AAACTGTCAA GCAAGCCATT TGGATTGCGG TCGCGTTCTG GACCGGCTTC
ACCTTCGTGG GCTATTTCGT TCCGATTCGC GAGCTGGGGG GAGAGCTGCT GGCCCTGCAA
GGAGGGTGGC AGATATTCTG GGTGATCTTC TATGGGTTGG CCACGTACGG CAACGCAGGA
TTCCTGCGCG AGCAGGTATG CAAATACATG TGCCCTTATG CGCGTTTCCA AAGCGCAATG
TTCGACAGGG ACACGCTGGT CGTCTCTTAC GATCCTGAGC GCGGCGAGCC TCGCGGGCCC
CGTAACAAGA CGGTAGACCA CAAAGCTGCG GGACTGGGTG ACTGCATCGA TTGCACGCTG
TGTGTCCAGG TCTGCCCAAC GGGTATCGAT ATTCGCAACG GACTGCAATA TGAATGCATT
GGTTGCGGTC TCTGCGTGGA CGCTTGCAAT ACCGTGATGG ATAAGATGAA GTATCCGCGC
GGGCTTATTC GCTTTTCAAC GCAGAACGGC GTCAAGAACC ACTGGACCCA ATCGCAAATG
CTCAAACGCG TGCTGCGACC CCGGGTGTTG TTCTATTCAG CGGTGCTGGT GGTGTTGTGC
ATCGGCATGC TGGCCAGCTT GGTGGTACGC ACCCCGTTGA AGGTGGACAT CGTGCGCGAC
CGCGCTGCGC TCTCGCGCAT CGTGGCGGGA GGCAAGCTGG AAAATATCTA CCGGCTGCAG
ATCATGAACG CCACGGAGGG GGCGCAGCGC TACACCATCA GCGCCCACGG TATGGAAGGG
CTGGAAGTGG CGTCCGAGAC CGCAATTGAC ATTGGACCGG CGGAATCGCG ATGGGTGGTT
GTCCGTCTTC AAATTCCGTA TGGCTCAGCA TCTCCTGGAT CGCATACGGT GTATTTCGAT
ATTCAAGCGC AGGGTGATAA AGCCCAAGTG GCAGAGAAAT CCGTGTTCCT TGTACCTCGC
TGA
|
|---|
| Protein sequence | MKPAEGQPRK VIPITPVGAE SSQTEVISLY EAQKKIYPRS ISGVFARWRW AMVFLTQLVF
YGLPWLEWGQ RQMVLFDLGT RRFYIFGLVL YPQDFIYLTG LLIISALSLF LFTAVAGRLW
CGFSCPQTVY TEMFMWIEHK VEGDRSARMR LDNGPWTFEK IWKKTVKQAI WIAVAFWTGF
TFVGYFVPIR ELGGELLALQ GGWQIFWVIF YGLATYGNAG FLREQVCKYM CPYARFQSAM
FDRDTLVVSY DPERGEPRGP RNKTVDHKAA GLGDCIDCTL CVQVCPTGID IRNGLQYECI
GCGLCVDACN TVMDKMKYPR GLIRFSTQNG VKNHWTQSQM LKRVLRPRVL FYSAVLVVLC
IGMLASLVVR TPLKVDIVRD RAALSRIVAG GKLENIYRLQ IMNATEGAQR YTISAHGMEG
LEVASETAID IGPAESRWVV VRLQIPYGSA SPGSHTVYFD IQAQGDKAQV AEKSVFLVPR
|
|---|
| |