Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1000 |
Symbol | |
ID | 7382317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 1042150 |
End bp | 1043589 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643654315 |
Product | cbb3-type cytochrome c oxidase subunit I |
Protein accession | YP_002552478 |
Protein GI | 222110214 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTCTT CACAAACAAG AGTTGCGCAC TACGACGACA CCGTAGTACG CCAGTTTTCT ATCATGGCTG TCGTATGGGG GGTGGTCGGC ATGCTGGTAG GCGTGTTCAT CGCCGCCCAG CTGACCTGGC CTGAACTCAA CTTCGGCATT CCATGGCTGA GCTATGGCCG GCTGCGTCCG CTGCACACCA ATGCCGTGAT CTTCGCATTC GGCGGCTGCG GCCTGTTCGC CACCAGCTAT TACGTGGTGC AGCGCACTTG CCAGGCGGGG CTGTTTCTGC CCAAGTTGGC GGCGTTCACT TTTTGGGGCT GGCAACTGGT CATCGTAGCG GCGGCCATCA GCCTGCCGCT GGGCTATACC TCCGGCAAGG AATATGCCGA GCTGGAATGG CCGATCGACA TCCTGATCGC TGCCGTGTGG GTCTCTTATG CGGTGGTGTT CTTCGGAACG ATCGGCCAGC GCAAGGTGAA GCACATTTAC GTGGCCAACT GGTTCTTCGG TGCGTTCATC ATCGCCGTGG CGCTGCTGCA CATCGTCAAC AGTGCGGCCA TTCCGGCGGG CTTCATGAAG AGCTACTCCG CCTACGCAGG CGTGCAGGAC GCCATGGTGC AGTGGTGGTA CGGCCACAAC GCCGTGGGCT TCTACCTCAC GACCGGCTTC CTGGGCATGA TGTATTACTT CATCCCGAAG CAGGCTGGCC GTCCGGTGTA CAGCTACCGC CTCTCCATCG TCCACTTCTG GGCGCTGATC TTCACGTACA TGTGGGCGGG TCCGCACCAC CTGCACTACA CCGCGCTGCC TGACTGGACG CAATCCGTGG GCATGGTGTT CTCGCTGATC TTGCTGGCGC CCAGCTGGGG CGGCATGATC AACGGGATCA TGACGCTGTC CGGTGCCTGG CACAAGCTGC GTGACGATCC CATCCTGCGC TTCCTGATCG TGTCGCTGTC GTTCTACGGC ATGTCCACGT TCGAAGGACC GATGATGTCC ATCAAGACCG TCAACGCGCT CTCGCACTAC ACCGACTGGA CTGTGGGGCA CGTGCACGCA GGCGCGCTGG GCTGGGTGGG TCTGATCACC ATGGGTTCGC TGTATTACCT GGTGCCTCGC CTGTTCGGCA AGGAGAAGAT GCACTCCATC AAGGCAATTG AACTGCACTT CTGGATGGCC ACCATCGGCA TCGTGCTGTA CATCGCCGCC ATGTGGATTG CTGGCGTGAT GCAAGGTCTG ATGTGGCGCG CAGTGAACCC CGACGGCACG CTGACCTATA CCTTCGTGGA AGGCGTCAAG GCGACCTATC CGTTCTACGC GATCCGCTTC TTTGGCGGTC TGCTGTACCT CGGCGGTATG TTGGTGATGG CATGGAACGT CTGGGTGACG GCGATCTCCG GACGCTCCGT CAAGGTAGCC ATTCCCGCCG TGAAACCCGC TCACGCCTGA
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Protein sequence | MDSSQTRVAH YDDTVVRQFS IMAVVWGVVG MLVGVFIAAQ LTWPELNFGI PWLSYGRLRP LHTNAVIFAF GGCGLFATSY YVVQRTCQAG LFLPKLAAFT FWGWQLVIVA AAISLPLGYT SGKEYAELEW PIDILIAAVW VSYAVVFFGT IGQRKVKHIY VANWFFGAFI IAVALLHIVN SAAIPAGFMK SYSAYAGVQD AMVQWWYGHN AVGFYLTTGF LGMMYYFIPK QAGRPVYSYR LSIVHFWALI FTYMWAGPHH LHYTALPDWT QSVGMVFSLI LLAPSWGGMI NGIMTLSGAW HKLRDDPILR FLIVSLSFYG MSTFEGPMMS IKTVNALSHY TDWTVGHVHA GALGWVGLIT MGSLYYLVPR LFGKEKMHSI KAIELHFWMA TIGIVLYIAA MWIAGVMQGL MWRAVNPDGT LTYTFVEGVK ATYPFYAIRF FGGLLYLGGM LVMAWNVWVT AISGRSVKVA IPAVKPAHA
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