Gene Dtpsy_0988 details

Gene Information

• Locus tag: Dtpsy_0988
• ID: 7382305
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 1028920
• End bp: 1030776
• Gene Length: 1857 bp
• Protein Length: 618 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 643654303
• Product: dihydroxy-acid dehydratase
• Protein accession: YP_002552466
• Protein GI: 222110202
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR00110] dihydroxy-acid dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCGCAT ACCGTTCCAA GACCTCCACC GCCGGCCGCA ACATGGCAGG GGCCCGCTCC 
CTGTGGCGCG CCACCGGCAT GAAAGACGCC GATTTCTCCA AGCCCATCAT CGCGGTGGTC 
AACTCGTTCA CCCAGTTCGT GCCCGGCCAT GTGCATCTGA AAGACCTGGG CCAGCTCGTG 
GCGCGCGAGA TCGAGGCCGC CGGCGGCGTG GCCAAGGAAT TCAACACCAT CGCCGTGGAT 
GACGGCATCG CCATGGGCCA CGACGGCATG CTGTATTCGC TGCCCAGCCG CGACATCATT 
GCCGACAGCG TGGAATACAT GGTGAACGCG CACTGTGCCG ACGCCATGGT CTGCATCAGC 
AACTGCGACA AGATCACCCC CGGCATGCTC ATGGCCGCCA TGCGGCTGAA CATTCCGGTG 
ATCTTCGTCT CCGGCGGCCC CATGGAGGCC GGCAAGGTGC AGCAGACCGT GCCCGGCACC 
AGCACCATCC AGATCAAGAA GCTGGACCTG ATCGACGCCA TGGTGATGGC CGCCGACGAC 
AAGGTGAGCG ACGCCGACCT GGCCGAGGCC GAGCGCAATG CCTGCCCCAC CTGCGGCTCC 
TGCTCGGGCA TGTTCACCGC CAACTCCATG AACTGCCTGA CCGAGGCGCT GGGCCTGTCC 
CTGCCCGGCA ACGGCACCGT GGTGGCCACG CACGCCGACC GCGAGCAGCT GTTCAAGCGC 
GCGGGCCGGC GCATCGTGGA GCTGGCGCGC CAGCACTACG AACAGGGCGA CGAGCGCATC 
CTGCCGCGCT CGGTCGGCTT CAAGGCCTTC GAGAACGCGA TGACGCTGGA CATCGCCATG 
GGCGGCTCCA CCAATACCAT CCTGCACCTG CTGGCGATCG CGCAGGAGGC CGGCATCGAC 
TTCAGCATGG CCGACATCGA CCGCCTGTCG CGCAGCGTGC CGCAGCTGTG CAAGGTGGCA 
CCCAACACCG ACAAGTACCA CATCGAGGAC GTGCACCGCG CCGGCGGCAT CTTCGCCATC 
CTGGGCGAGC TGGAGCGTGC GGGCAAGCTG CACACCGACG TGCCCACCAT CCACGCACCC 
ACACTGGGCG AGGCGCTGGC GCAGTGGGAT GTGACGCGCA CGCAGGACGA AGCCGTCCAG 
ACGTTCTACA AGGCCGGCCC CGGCGGCGTG CCCACGCAGG TCGCCTTCAG CCAGAGCGTG 
CGCTGGCCCA GCCTGGACCT GGACCGCGCC GCGGGCTGTA TCCGCTCCGC GGAGCACGCC 
TTCAGCAAGG AAGGCGGCCT GGCGGTGCTC ACCGGCAACA TCGCCAAGGA CGGCTGCGTG 
GTCAAGACCG CGGGCGTTCA TGAATCCATC CTGGTCTTCG AAGGCCCGGC GCATGTGGTC 
GAAAGCCAGG ACGAGGCGGT GGAGAACATC CTGGCCGACA AAGTGAAGGC CGGCGACGTG 
GTGGTGGTGC GCTACGAGGG CCCCAAGGGC GGCCCCGGCA TGCAGGAAAT GCTCTACCCC 
ACGAGCTACA TCAAATCCAA GGGCCTGGGC AAGGCCTGCG CGCTGCTGAC CGACGGGCGC 
TTCTCGGGCG GCACCTCGGG CCTGTCCATC GGCCACTGCT CGCCCGAGGC GGCAGCCGGC 
GGCGCGATCG GCCTGGTGCG CGACGGCGAC CGCATCCGCA TCGACATTCC CAACCGCACC 
ATCAACGTAC TGGTGAGCGA CGAGGAGTTG GCCCAGCGCC GCGCCGAGCA GGACGCCAAG 
GGCTGGAAGC CCGCCCAGCC ACGTCCGCGC AAGGTCTCGG CCGCGCTCAA GGCCTATGCC 
AAGCTCGTGA CGTCGGCCGA CAAGGGCGCG GTGCGCGACG TGTCGCTGCT GGACTGA 

 

Protein sequence

MPAYRSKTST AGRNMAGARS LWRATGMKDA DFSKPIIAVV NSFTQFVPGH VHLKDLGQLV 
AREIEAAGGV AKEFNTIAVD DGIAMGHDGM LYSLPSRDII ADSVEYMVNA HCADAMVCIS 
NCDKITPGML MAAMRLNIPV IFVSGGPMEA GKVQQTVPGT STIQIKKLDL IDAMVMAADD 
KVSDADLAEA ERNACPTCGS CSGMFTANSM NCLTEALGLS LPGNGTVVAT HADREQLFKR 
AGRRIVELAR QHYEQGDERI LPRSVGFKAF ENAMTLDIAM GGSTNTILHL LAIAQEAGID 
FSMADIDRLS RSVPQLCKVA PNTDKYHIED VHRAGGIFAI LGELERAGKL HTDVPTIHAP 
TLGEALAQWD VTRTQDEAVQ TFYKAGPGGV PTQVAFSQSV RWPSLDLDRA AGCIRSAEHA 
FSKEGGLAVL TGNIAKDGCV VKTAGVHESI LVFEGPAHVV ESQDEAVENI LADKVKAGDV 
VVVRYEGPKG GPGMQEMLYP TSYIKSKGLG KACALLTDGR FSGGTSGLSI GHCSPEAAAG 
GAIGLVRDGD RIRIDIPNRT INVLVSDEEL AQRRAEQDAK GWKPAQPRPR KVSAALKAYA 
KLVTSADKGA VRDVSLLD