Gene Dtpsy_0981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_0981 
Symbol 
ID7382298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp1020257 
End bp1021546 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content69% 
IMG OID643654296 
Productglycine betaine/L-proline ABC transporter, ATPase subunit 
Protein accessionYP_002552459 
Protein GI222110195 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4175] ABC-type proline/glycine betaine transport system, ATPase component 
TIGRFAM ID[TIGR01186] glycine betaine/L-proline transport ATP binding subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCAAGC AAATCATCAT CGACCATGTC TTCAAGGTCT TCGGCGACAC GCCGCAGGAA 
GCGCTGCGCC TGGTGCAGCA GGGCCTGAGC AAGCAGCAGA TCCTGGAGCG CACGGGCCAT
TCCATCGGCG TGTTCGATGC CAGCTTCACC ATCGAGGCCG GCGAAATCTT CGTCGTCATG
GGCCTATCGG GCTCGGGCAA GTCCACGCTG GTGCGCATGC TCAACCGCCT GATCGAGCCC
ACCAGCGGCC GCATCCTGGT GGACGGCCAA GACATCAACC GTCTGGGCGA CCGCGAGTTG
CGCGCGCTGC GGCGCAAGGA CATCAGCATG GTGTTCCAGT CGTTCGCCCT GATGCCGCAC
ATGACGGTGC TGGACAACGC CGCCTTCGGG CTGGAACTCG CCGGAGTGGA CCGTGCCGAG
CGCCAGCAGG CAGCGCAGGA GGCCCTGCAG CAGGTGGGCC TGGGCGCCTG GGGCGCCAGC
TACCCCGACG AACTCTCGGG CGGCATGCAG CAACGCGTGG GGCTGGCGCG CGCGCTGGCC
GCGGACCCAT CCATCCTGCT CATGGACGAG GCGTTCTCCG CGCTGGACCC CATCATCCGC
ACCGAGATGC AAAGCGAGCT GCTGCGCCTG CAGCAGATCA AGCGCCGCAC CATCGTCTTC
ATCTCGCACG ACCTGGACGA GGCCATGCGC ATCGGCGACC GCATCGCCAT CATGAAGGAC
GGCCACGTGG TGCAGGTGGG CACGCCCGAC GAGATCCTGC GCGCGCCTGC CAACGACTAC
GTGCGCAGCT TCGTGCGCGG CGTGGACGCT GCGGCGGTGT TCAAGGCGGC CGACATCGCG
CGCCAGGCGC TCACCGTGGT GTCCGAGCAC GACGACCGCG GCTGCCGCGC GGCACTGCGC
CTGCTGGAGG ACTCGGACCG CGACCACGCC TACGTGCTCA ACAGCCGCAA GCGCCTGCTG
GGCGTGGTGT CGTCGCAGTC GCTGCGCGAA GCGCTGCACG GCCGCCAGGG CGCGCTGGGC
CTGCACCACG CCTTCTTACC CAATGCCCAG CCGCTGGATG CCTCCACGCC GGTGGCGGAC
CTGTTCGGCC CCATGAGCAG TGCGCCCTGC CCGCTGCCGG TGGTGGACGA GGACGGCATC
TACCAGGGCG TGATCAGCCG CACCACACTG ATGAAGTTCC TGGACCGCGA CACGCCGCCC
GTGCCGCCGC CGCAGGCGGA GGTGCCACCC ATCCAGCTCA ACCCCCACTT CCCGGCGCAA
GCCAGCACGC CGGTGGCAGC GCCCCGCTAA
 
Protein sequence
MAKQIIIDHV FKVFGDTPQE ALRLVQQGLS KQQILERTGH SIGVFDASFT IEAGEIFVVM 
GLSGSGKSTL VRMLNRLIEP TSGRILVDGQ DINRLGDREL RALRRKDISM VFQSFALMPH
MTVLDNAAFG LELAGVDRAE RQQAAQEALQ QVGLGAWGAS YPDELSGGMQ QRVGLARALA
ADPSILLMDE AFSALDPIIR TEMQSELLRL QQIKRRTIVF ISHDLDEAMR IGDRIAIMKD
GHVVQVGTPD EILRAPANDY VRSFVRGVDA AAVFKAADIA RQALTVVSEH DDRGCRAALR
LLEDSDRDHA YVLNSRKRLL GVVSSQSLRE ALHGRQGALG LHHAFLPNAQ PLDASTPVAD
LFGPMSSAPC PLPVVDEDGI YQGVISRTTL MKFLDRDTPP VPPPQAEVPP IQLNPHFPAQ
ASTPVAAPR