Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_0981 |
Symbol | |
ID | 7382298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 1020257 |
End bp | 1021546 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643654296 |
Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
Protein accession | YP_002552459 |
Protein GI | 222110195 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCAAGC AAATCATCAT CGACCATGTC TTCAAGGTCT TCGGCGACAC GCCGCAGGAA GCGCTGCGCC TGGTGCAGCA GGGCCTGAGC AAGCAGCAGA TCCTGGAGCG CACGGGCCAT TCCATCGGCG TGTTCGATGC CAGCTTCACC ATCGAGGCCG GCGAAATCTT CGTCGTCATG GGCCTATCGG GCTCGGGCAA GTCCACGCTG GTGCGCATGC TCAACCGCCT GATCGAGCCC ACCAGCGGCC GCATCCTGGT GGACGGCCAA GACATCAACC GTCTGGGCGA CCGCGAGTTG CGCGCGCTGC GGCGCAAGGA CATCAGCATG GTGTTCCAGT CGTTCGCCCT GATGCCGCAC ATGACGGTGC TGGACAACGC CGCCTTCGGG CTGGAACTCG CCGGAGTGGA CCGTGCCGAG CGCCAGCAGG CAGCGCAGGA GGCCCTGCAG CAGGTGGGCC TGGGCGCCTG GGGCGCCAGC TACCCCGACG AACTCTCGGG CGGCATGCAG CAACGCGTGG GGCTGGCGCG CGCGCTGGCC GCGGACCCAT CCATCCTGCT CATGGACGAG GCGTTCTCCG CGCTGGACCC CATCATCCGC ACCGAGATGC AAAGCGAGCT GCTGCGCCTG CAGCAGATCA AGCGCCGCAC CATCGTCTTC ATCTCGCACG ACCTGGACGA GGCCATGCGC ATCGGCGACC GCATCGCCAT CATGAAGGAC GGCCACGTGG TGCAGGTGGG CACGCCCGAC GAGATCCTGC GCGCGCCTGC CAACGACTAC GTGCGCAGCT TCGTGCGCGG CGTGGACGCT GCGGCGGTGT TCAAGGCGGC CGACATCGCG CGCCAGGCGC TCACCGTGGT GTCCGAGCAC GACGACCGCG GCTGCCGCGC GGCACTGCGC CTGCTGGAGG ACTCGGACCG CGACCACGCC TACGTGCTCA ACAGCCGCAA GCGCCTGCTG GGCGTGGTGT CGTCGCAGTC GCTGCGCGAA GCGCTGCACG GCCGCCAGGG CGCGCTGGGC CTGCACCACG CCTTCTTACC CAATGCCCAG CCGCTGGATG CCTCCACGCC GGTGGCGGAC CTGTTCGGCC CCATGAGCAG TGCGCCCTGC CCGCTGCCGG TGGTGGACGA GGACGGCATC TACCAGGGCG TGATCAGCCG CACCACACTG ATGAAGTTCC TGGACCGCGA CACGCCGCCC GTGCCGCCGC CGCAGGCGGA GGTGCCACCC ATCCAGCTCA ACCCCCACTT CCCGGCGCAA GCCAGCACGC CGGTGGCAGC GCCCCGCTAA
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Protein sequence | MAKQIIIDHV FKVFGDTPQE ALRLVQQGLS KQQILERTGH SIGVFDASFT IEAGEIFVVM GLSGSGKSTL VRMLNRLIEP TSGRILVDGQ DINRLGDREL RALRRKDISM VFQSFALMPH MTVLDNAAFG LELAGVDRAE RQQAAQEALQ QVGLGAWGAS YPDELSGGMQ QRVGLARALA ADPSILLMDE AFSALDPIIR TEMQSELLRL QQIKRRTIVF ISHDLDEAMR IGDRIAIMKD GHVVQVGTPD EILRAPANDY VRSFVRGVDA AAVFKAADIA RQALTVVSEH DDRGCRAALR LLEDSDRDHA YVLNSRKRLL GVVSSQSLRE ALHGRQGALG LHHAFLPNAQ PLDASTPVAD LFGPMSSAPC PLPVVDEDGI YQGVISRTTL MKFLDRDTPP VPPPQAEVPP IQLNPHFPAQ ASTPVAAPR
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