| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0979 |
|---|
| Symbol | proX |
|---|
| ID | 7382296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 1017914 |
|---|
| End bp | 1018993 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643654294 |
|---|
| Product | glycine betaine transporter periplasmic subunit |
|---|
| Protein accession | YP_002552457 |
|---|
| Protein GI | 222110193 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.84837 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCTTC TGTCGCTGAC CTCTCCCACA CACACTGCAC GTTTCGGCGC ATGCGCCGCC
CTCGCCCGCC GCCTGCGCGC GCCGTTGGCC GCGGTTGCCG CGGGTCTGGG CCTGGCGCTG
GGCGCCACCG CTGCGCTGGC CCAGCCCACC GCCCTGCCCG GCAAGGGCGT GAAGGTGCTG
CCTCTCAAGA GCTCGATCGC CGAGGAGACC TTCCAGACAC TGCTGGTCAT GAAGGGCCTG
GAAAAACTCG GCTACGACGT GCAGCCCATC CAGGAGGTGG AGTACCCCAC GGCCCACATC
GCCATCGGCA ATGGCGACGC CACGTTCATG GCCGACCACT GGAACCCGCT GCATGCCGAC
TATTACAAGA ACGCCGGCGG CGACGCGAAG CTCTACCGGC GCGGCACCTA CTCGGGCAAC
GCGGCGCAGG GTTACCTGAT CGACAAGAAG ACCGCCGACG CGCATGGCAT CACCAACGTC
GAGCAGCTCA AGGACCCGAA AATTGCCCAG CTGTTCGACA CCAACGGCGA CGGCAAGGCC
GACCTGACGG GCTGCACGCC CGGCTGGGGC TGCGAGGCCA TGATCGAGCA CCACCTGGAC
GCCTACGGCC TGCGCAACAC CGTCACGCAC CAGCAGGGCA CCTACTCCGC GCTGATCGCC
GACACCATCA CGCGCTACCG CGCGGGCAAG CCCGTCCTGT ACTACACCTG GACGCCCTAT
TGGGTGAGCA ACGAGCTCAA GCCCGGCAAG GACGTGGTCT GGCTGGAAGT GCCCTTTTCC
TCCCTGCCCG GTGAGCAAAA AGGCCTGGAC ACGCGCCTGC CCAACGGCAA GAACTACGGC
TTCGTGGTGA ACCAGCAGCA GATCGTGGCC AACAAGGCCT GGGCCGAGGC CAACCCCGCC
GCCGCCAAGC TGTTCGAAGT GATGCAGCTG CCCGTGGCCG ACATCAACGC CCAGAACCAC
CTGATGAGCC GGGGCCAGAA CAAGGCCGCC GACATCGAAC GCCATGTGAA CGGCTGGATC
AAGGCACACC AGAAGACCTT TGACGGCTGG GTGCAGCAGG CGCTGGCCGC GGCCCGCTGA
|
|---|
| Protein sequence | MTLLSLTSPT HTARFGACAA LARRLRAPLA AVAAGLGLAL GATAALAQPT ALPGKGVKVL
PLKSSIAEET FQTLLVMKGL EKLGYDVQPI QEVEYPTAHI AIGNGDATFM ADHWNPLHAD
YYKNAGGDAK LYRRGTYSGN AAQGYLIDKK TADAHGITNV EQLKDPKIAQ LFDTNGDGKA
DLTGCTPGWG CEAMIEHHLD AYGLRNTVTH QQGTYSALIA DTITRYRAGK PVLYYTWTPY
WVSNELKPGK DVVWLEVPFS SLPGEQKGLD TRLPNGKNYG FVVNQQQIVA NKAWAEANPA
AAKLFEVMQL PVADINAQNH LMSRGQNKAA DIERHVNGWI KAHQKTFDGW VQQALAAAR
|
|---|
| |