| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0974 |
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| Symbol | |
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| ID | 7382291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 1011298 |
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| End bp | 1012857 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643654289 |
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| Product | hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit |
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| Protein accession | YP_002552452 |
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| Protein GI | 222110188 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0854287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACGA CCATCCGGTA CAACGACCTT GTGGAGTCCG TAGCTGCCGC GCTGCAGTAC
ATCTCCTACT ACCACCCCGC CGACTATATC CAGCACCTGG CCCGCGCCTA CGAGCGCGAG
CAGAGCCCCG CGGCCAAGGA TGCGATGGCG CAGATCCTCA CCAACAGCAA GATGAGCGCC
ACGGGCCACC GCCCGATCTG CCAGGACACG GGCATCGTGA ACGTGTTCCT GAAGGTGGGC
ATGGGCGTGC GCTTCGAGGG CTTCGCCGCC GACCAGAGCC TGGAGGACGC CATCAACGAA
GGCGTGCGCC GCGGCTACAA CCACCCCGAC AACACGCTGC GCGCCTCGGT CGTCGCCGAC
CCGCAGTTCG CTCGCAAGAA CACCAAGGAC AACACACCCG CCGTCATCAG CGTGCAGATC
GTGCCCGGCG ACACGCTGGA CGTGACCGTG GCCGCCAAGG GCGGCGGCAG CGAGAACAAG
TCCAAGATGG TCATGATGAA CCCCAGCGAC AACCTGGTGG ACTGGGTGCT CAAGACCGTG
CCCACCATGG GCGCCGGCTG GTGCCCGCCG GGCATGCTGG GCATCGGCAT CGGTGGCACG
GCGGAAAAGG CCGTGCTGCT GGCCAAGGAA AGCCTGATGG AAGACTTGGA CATGTACGAG
CTGCTGGCCA AGAGCCAGCG CGGCGAGAAG CTGGACCAGG TCGAAGAGCT GCGCCTGGAG
CTGTACGAGA AGGTCAACGC CCTCGGCATC GGCGCTCAGG GCCTGGGCGG CCTGGCCACC
GTGCTGGACG TGAAGATCAA GATGTACCCC ACGCACGCGG CCAGCAAACC CGTGGCCATG
ATCCCCAACT GCGCGGCCAC GCGCCACGCG CACTTCGTGA TGGACGGCTC CGGCCCCGTC
TACATGGACC CGCCGAGCCT GGACCTGTGG CCCAAAGTGG ACTGGGCGCC CAACACCGAG
ACCAGCAAGC GCGTGGACCT CAACACCCTT ACCAAGGAAG AGGTCGCGAG CTGGAAGCCT
GGCCAGACGC TGCTGCTGAA CGGCAAGATG CTCACCGGCC GCGACGCCGC GCACAAACGC
ATCCAGGACA TGCTGGCCAA GGGTGAGAAG CTGCCCGTGG ACTTCACCAA CCGCGTGATC
TACTACGTGG GCCCCGTGGA CCCGGTGAAG GACGAGGCCG TGGGCCCCGC CGGCCCCACC
ACCGCCACGC GCATGGACAA GTTCACCGAC ATGATGCTGG AGCAGACCGG CCTGATCGCC
ATGATCGGCA AGGCCGAGCG CGGCCCGGTC GCCATCGAGT CCATCAAGAA CCACAAAAGC
GCCTACCTGA TGGCCGTGGG CGGCGCCGCC TACCTGGTCA GCAAGGCCAT CAAGAACGCC
AAGGTGGTGG GCTTTGCGGA CCTGGGCATG GAAGCGATCT ATGAGTTCGA CGTGGTGGAC
ATGCCCGTCA CCGTGGCCGT GGACGCGGGC GGCACCAGCG CCCACATCAC CGGCCCGGCC
GAGTGGCAAA AGAAAATCGC CGCGGGCGAA TACAAGGTCG TGCCCATGGT CGCCGCCTGA
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| Protein sequence | MTTTIRYNDL VESVAAALQY ISYYHPADYI QHLARAYERE QSPAAKDAMA QILTNSKMSA
TGHRPICQDT GIVNVFLKVG MGVRFEGFAA DQSLEDAINE GVRRGYNHPD NTLRASVVAD
PQFARKNTKD NTPAVISVQI VPGDTLDVTV AAKGGGSENK SKMVMMNPSD NLVDWVLKTV
PTMGAGWCPP GMLGIGIGGT AEKAVLLAKE SLMEDLDMYE LLAKSQRGEK LDQVEELRLE
LYEKVNALGI GAQGLGGLAT VLDVKIKMYP THAASKPVAM IPNCAATRHA HFVMDGSGPV
YMDPPSLDLW PKVDWAPNTE TSKRVDLNTL TKEEVASWKP GQTLLLNGKM LTGRDAAHKR
IQDMLAKGEK LPVDFTNRVI YYVGPVDPVK DEAVGPAGPT TATRMDKFTD MMLEQTGLIA
MIGKAERGPV AIESIKNHKS AYLMAVGGAA YLVSKAIKNA KVVGFADLGM EAIYEFDVVD
MPVTVAVDAG GTSAHITGPA EWQKKIAAGE YKVVPMVAA
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