| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0961 |
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| Symbol | |
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| ID | 7384464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 993876 |
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| End bp | 998711 |
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| Gene Length | 4836 bp |
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| Protein Length | 1611 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643654276 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_002552439 |
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| Protein GI | 222110175 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.100608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGAGC GCAAGGAACG GCTGGCTGTT CTGCGCGATT CGCTGCGCGA CCCACAGGGC
CGGTGGTTGC GGGGCGCCCT ATGGGTGCTC GTGCTGGCGG CGCTGGGTGC CTGGCTGGCA
GTGGAAGCGG TCGCGCTGGT GCGCTCGGAA CAGCGCCAAC ACGAACGCAA TCAGCTGCTG
GAAGGCATGG AGCAGACGCT GCTGGGCGAG AGCAGCAACG GCCCGCTGCT GGGGATGGTT
ACCTTGCTTG GCTTGAGCGA GCCGTCACTC AAGGCTGCCG CGCAGGGCTT TCTGCCCTAC
GATGCGCCGC CGGTGCTGGC GCGCCTGGGC GTCATCCGCG GCCGCTTCAT GGTGGATGGC
GCCTACGTGA TCGCGCGCGA CGGCACGGTG GTAGCGCATG ACACCGCTGG TAACCGCACG
ACCGGTGCGC AGCTGGGACA TCGGCCCTAT TTTCAGCAGG CCTTGCAGGG CAATGCGTCC
GTATATGCCG CCCTGGGCGG CACGTCGCAG GAGCGCGGCC TCTATTACGC AGCGCCGCTG
TATGAGAGCG ATACCCCGTC CAGTCCCATC ATCGGTGTGG TTGCCGTCAA GGTGGGGTTC
TCCCATTTCG ACCGCCTGCT CACGCGGGCG GGGCATCCCG TGCTGCTGAT GTCGCCGCAG
GGCGTGGTGT TCTCTTCCAC CCGTCCGGAG TGGCTCTACG CGATGACCGC GCCCCTGACG
CAGGAACGCA TCGACGCGGT GCGCAGCACG CGCCAGTTTG GCAGCCGTTT CGACAACGGG
CTGGTGTCGG CCCTGCCGTT TTCCATCGAC TCCCGCGAAG CGCTGATCGA CGGCGTGCGC
TATGCCGTGG GCCGCCGCGC CGTGGACTGG GAGGACCCTG CGGGCCCCTG GCAGCTGGTG
TTGCTGGACG ACATGAGTGC CATCATGCCC ATGGGGTTGC GCTGGATGGT GGGAGGGGGC
GCGTTCGCGC TCTTCGCGCT CGTGGGTGCC ATGGCGCTGG ACGCGCTGCG CAACCGGCGC
CGCCTGGCGG AGAGCATGCA GCGCTTTTCC GTGCTGGGCG CGGCACTGGA GAACAGCCCC
ATTTCCATCG TCATCACCGA TGCGGAAGGG GTGATCGCGT GGGTCAATCC CCAGTACGAA
CGCAACACCG GCTACACGCT GGGTGAAGTG CGCGGGCGCA AGCCATCGAT AGCCGCCAGC
GAACACACGC CCGCCGGTAC TTACCGGGAC ATGTGGAGCC GGTTGCTGGC CGGCCATTCC
TGGCGCGGAC GCTTCGTGAA CCGGCGCCGG GACGGCACCC TGTACCACGA GGAAGCTACG
CTGTCGCCGG TGTTCGACGC CAAGGGCCGG CGCATCGCGA TCGTGGGGCT GCTGCAGGAC
GTGACCGCAC GCATCGAGGC CGCGCAAGAG CTGGAGCGGC GTGAGCGCCA CCTGAGCGAA
CTGCTGGAAC AACAGACAGC GCTTTTTGAC AACGCGCCGC CCATCGTGCT CGTCTGCGAC
GGGCAGATAC GGCAGTTCAA CCGCGCCCTG GCGGAACTGC TGCGCTCCTC GGACGAGGCC
CTGGCGGGAA CCCCGGTACA GGAGCTGTTC GGAGGCGAGG CCGGCTACGG CGCCTTCACC
GCACGGACCG TTCCCATGCT TCTGGCCGGT GGCTCGGTGC GCGAGCAGGC CGTGCTGCGG
CGTCCGGACG GCACGTCGTT CACGGCGCGC ATGGCGGGCC GCGGGCTGAA GATGGAGGGC
GTGCAGATCG CATCGCTGTG GGTGATCGAG GACGTGACCG AGGCGCAGCG CGCCGAGGCT
GCCACGCGCG AAGCCAACGC GCGGCTGGAG CTGGCGCAGG AGGCGGGGCA CATCGGCGTG
TTCGACTACA ACCTGCTGAC GCAGCGCATG GTGTGGTCGC CCCAGCTGGA GCAGCTGTAT
GGCGCGGCGT CGCTGCCGGC GCAAAAGGAC GGGCATGCCG CAGAGAGGCC GTTCCAGGCG
TGGGTGGATG TGATCCATCC CGAAGACCGT GCGCGCGTGC AAGGCCTGCT GGCGCAGGCA
CAGGCCGGCC AGGGCGGCGG CCGTCTGCGC GATTCCTGGC GCATCGTGCG CGCCGATGGC
AGTACGCGCT GGATCCTGTG TACCGCGCGC GTGGTGCGCG ACGAAGCAGG ACAGGCCGCG
CGCATCATCG GCGTGCAGGT GGATGTGCAT GACCAGAAGA TGTTGGAGGC GCGCGTGGCC
GAGCAGCTCG CCTTCCAGCA GGCGCTGATC GATGCCATTC CGGTACCGCT CTTCTACAAA
GACGCGCAGG GGCGCTACCT GGGTTTCAAC CGGGCCTATG TCCAGGCCTT CGACATCCAT
ACGGAAGACT TCATCGGCAA GACGGTGCTG GACCTGGAGT TCCTGCCCAT GCTGGAGCGC
GAACGCCTGC ACGCGGATAC CGAGGCCGCG CTGCGGGGCG CGCAGTCCGT GCACCGCGAG
GTGGCCATGC CGTATGCCGA TGGACTGGTG CACCACACGA TGTTCTGGCT GCATGGGTTC
AACCGCCCGG ACGGCTCGGC GGGCGGAGTC ATCGGCACCT TCGTGGACGT CTCCGACCGC
CAGCGCGCCG AAGTGGAACT GCGCCGCGCC AAGGAACTGG CCGAGGAGAC GGCGGCGCTC
AAGTCGCGTT TCCTGGCCAA CATGAGCCAT GAGATCCGCA CGCCGCTTAA CGCGATCATC
GGCATGTCGC ACCTGGCCCT GAAGTCGGGG CTGGATGCGC GCCAAAGCGG CTACGTGGTG
CGCATGCAGC AGGCGGGCCA ACATCTGCTG GGCGTGATCA ACGACATCCT GGACTTCTCC
AAGATCGAGG CCGGCAAGCT CGTGGTGGAG CGCAGCCCCT TCGCGCTGGA CCGTATGCTG
GAAGGCGTGG CCGACGTGGT GGGCTTCAAG GCGGCGGCCA AGGGGCTGGA GCTGGTGCTG
GACGTGGCCC CCGACGTGCC GCAGCACTTG GTGGGCGACG CGTTGCGCCT GGGGCAGATC
CTCATCAACT TTGCCAATAA CGCCGTTAAG TTCACCGAGC AAGGAGAAAT CCATCTGCTG
GTGCGGCTGG AGCGCAACGA GGGCGCGCGC GTATGGCTGC GCTTCGAGGT GCGCGACACG
GGCATCGGCA TCGCGCCGCA GCAGATGCAG CGCTTGTTCC AGAGCTTTGA ACAGGCGGAC
ACGTCTACCA CGCGCCGATA CGGTGGCACC GGCTTGGGCC TGGCCATTAG CAAGAGCCTG
GCCGAGTTGA TGGGCGGTGA GGTAGGCGTG CGCAGCGAGC TGGGGCATGG CTCGGCCTTT
TGGGTGACCG TGCCGCTGGA GCGTGGCGAG CCCCTGCCCC GCGCGCTGCT GCGCAGCGAT
TGGCGCGGCT GCCGGGTGCT GGTGGTGGAC GACAACCACA CCGCCGCCCA GGTGCTGGTG
GACATGCTGC AGACCATGGG CCTGCAGGCC ACGCAGGTGC ACTCGGGCGT GCAGGCGCTG
CAGGCACTGC GCGACGCGGT GGCCGAGCAG CGCCCCTACG GCCTGCTGCT GCTGGATTGG
CACATGCCGG GGATGGACGG GATCGAGTTG GCGCGCCGCA TTCGCGGGCT GGGCCTTGCG
CATATCCCGC AGATGCTGAT GGTTACGGCG CACGGGCGCG ACGAGGTGAT GGACGCAGCG
CGCAGCGCGG GGATCGACAA CGTGCTCGTC AAGCCGGTGA GCGCGTCGGT GCTGTTCGAC
ACGCTCATGC AGCCGCTGGC CCAGGCGTGG GACGTGCATC CGCTGCCGCG GTCTGCGTCC
GGCGCCGCAC CCGCCGTGCT GCGCGGCGCG GTGGTGCTGC TGGTGGAAGA CAACGAGCTC
AACCAGATCG TGGCGCAGGA GCTGCTGCGC GATGCCGGCA TGCACGTGGA TGTGGCGTCC
AACGGCCAGG AGGCCATCGC ATGCATCGAC CGGCGCCGGT ACGACGTGGT GCTTATGGAC
ATGCAGATGC CCGTGATGGA TGGCGAAACG GCCACGCGGC AACTGCGTGC CGACCCGCGC
CATGCCGGCC TGCCGATCAT CGCCATGACT GCCAATGCCA TGCAGGCCGA CCGGGAGCGC
TGCTTTGCCG CGGGCATGAA CGACCACGTG CCCAAGCCCA TCGACCCCGA CGTGCTGTGG
GCCACGCTGG TGCGCTGGCT GTCGCCGCGC CCCGAGGCGG CATCGCACTC GCCCGCACCC
CCGGCGAACG CGCCGCTGGC ATCTGCATTC GCGCCTGCCC TGCCACAGGG CGTGCCGGGC
CTGGATACCG CGCTGGGCCT GAAGCGGGCT TCGGGTAAGC CGGGGCTGTA CGCCGAACTG
TTGCAGCGCT TCGCGCTGAG CCAGAGTGAC GTCGTCCAGA ACCTGCAGGC GGCCATACAG
GCGGAGGACT GGGCACTGGC CGAGCGCACC GCGCACACGC TGCGCTCGGT GGCCGCCAAC
CTCGGTGCGC AGCCGGTGTC GCGGCATGCG CAGGCACTGG AGCAGGCGCT GCGCTCTCAG
GCGCCGGCAG AAACGCTCCA GCCCCTGCTG GCGGCCCTGG CAGAGCATAT GGCGCCTTTG
CTGCAGGCGT TGGGTGCCTG GACCCGGCAG GCCCCGGGCG CGGGCGCTCG CGAGGCCACC
GTGCCGCCGC AGACGCCCGC CCAGCTGCTG CGCGGGCTGC GTACGCTGCT GCGCGCGGAC
GACCCGGCCG CAGGCGACTA CCTCCAGCGC AACGCGGCTG GGCTGGCCGC CTTGCTGGGT
GCGGACTTCG ATGCGCTGGA GCGCAGCGTG CGCAGCTTCG CCTATGACGA CGCGCTGCGG
CGGCTGGAGG CATGCCCGGC GGCCCCGGCG GAATGA
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| Protein sequence | MPERKERLAV LRDSLRDPQG RWLRGALWVL VLAALGAWLA VEAVALVRSE QRQHERNQLL
EGMEQTLLGE SSNGPLLGMV TLLGLSEPSL KAAAQGFLPY DAPPVLARLG VIRGRFMVDG
AYVIARDGTV VAHDTAGNRT TGAQLGHRPY FQQALQGNAS VYAALGGTSQ ERGLYYAAPL
YESDTPSSPI IGVVAVKVGF SHFDRLLTRA GHPVLLMSPQ GVVFSSTRPE WLYAMTAPLT
QERIDAVRST RQFGSRFDNG LVSALPFSID SREALIDGVR YAVGRRAVDW EDPAGPWQLV
LLDDMSAIMP MGLRWMVGGG AFALFALVGA MALDALRNRR RLAESMQRFS VLGAALENSP
ISIVITDAEG VIAWVNPQYE RNTGYTLGEV RGRKPSIAAS EHTPAGTYRD MWSRLLAGHS
WRGRFVNRRR DGTLYHEEAT LSPVFDAKGR RIAIVGLLQD VTARIEAAQE LERRERHLSE
LLEQQTALFD NAPPIVLVCD GQIRQFNRAL AELLRSSDEA LAGTPVQELF GGEAGYGAFT
ARTVPMLLAG GSVREQAVLR RPDGTSFTAR MAGRGLKMEG VQIASLWVIE DVTEAQRAEA
ATREANARLE LAQEAGHIGV FDYNLLTQRM VWSPQLEQLY GAASLPAQKD GHAAERPFQA
WVDVIHPEDR ARVQGLLAQA QAGQGGGRLR DSWRIVRADG STRWILCTAR VVRDEAGQAA
RIIGVQVDVH DQKMLEARVA EQLAFQQALI DAIPVPLFYK DAQGRYLGFN RAYVQAFDIH
TEDFIGKTVL DLEFLPMLER ERLHADTEAA LRGAQSVHRE VAMPYADGLV HHTMFWLHGF
NRPDGSAGGV IGTFVDVSDR QRAEVELRRA KELAEETAAL KSRFLANMSH EIRTPLNAII
GMSHLALKSG LDARQSGYVV RMQQAGQHLL GVINDILDFS KIEAGKLVVE RSPFALDRML
EGVADVVGFK AAAKGLELVL DVAPDVPQHL VGDALRLGQI LINFANNAVK FTEQGEIHLL
VRLERNEGAR VWLRFEVRDT GIGIAPQQMQ RLFQSFEQAD TSTTRRYGGT GLGLAISKSL
AELMGGEVGV RSELGHGSAF WVTVPLERGE PLPRALLRSD WRGCRVLVVD DNHTAAQVLV
DMLQTMGLQA TQVHSGVQAL QALRDAVAEQ RPYGLLLLDW HMPGMDGIEL ARRIRGLGLA
HIPQMLMVTA HGRDEVMDAA RSAGIDNVLV KPVSASVLFD TLMQPLAQAW DVHPLPRSAS
GAAPAVLRGA VVLLVEDNEL NQIVAQELLR DAGMHVDVAS NGQEAIACID RRRYDVVLMD
MQMPVMDGET ATRQLRADPR HAGLPIIAMT ANAMQADRER CFAAGMNDHV PKPIDPDVLW
ATLVRWLSPR PEAASHSPAP PANAPLASAF APALPQGVPG LDTALGLKRA SGKPGLYAEL
LQRFALSQSD VVQNLQAAIQ AEDWALAERT AHTLRSVAAN LGAQPVSRHA QALEQALRSQ
APAETLQPLL AALAEHMAPL LQALGAWTRQ APGAGAREAT VPPQTPAQLL RGLRTLLRAD
DPAAGDYLQR NAAGLAALLG ADFDALERSV RSFAYDDALR RLEACPAAPA E
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