| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0958 |
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| Symbol | |
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| ID | 7384461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 988910 |
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| End bp | 990736 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643654273 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_002552436 |
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| Protein GI | 222110172 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTCA TCACAAGCAA TTACGCCCCC GTCATGTTCG GGGGCCTGAT CATCTTCCTG
CTGCTGGGCT TCCCCGTGGC GTTCAGCCTG GGCGCCTGCG GCCTGCTGTT CGGCTTCCTG
GGGATCGAGT TGGGGGTCTT TCCTTCGTCC GTGATGGCCT GGCTGCCGCA GCGCCTGATC
GGCATCATGG CCAACGACAC GCTGCTGGCG GTGCCCTTCT TCACGCTCAT GGGCCTGATC
ATGGAGCGCA GTGGTATGGC TGAGGACCTG CTCGACACGG TGGGCCAGGT GTTCGGCCCT
TTGCGCGGCG GCCTGGCGCT GGCGGTGGTT TTCGTGGGCG CGCTGCTGGC GGCCACCACC
GGTGTGGTGG CGGCCTCGGT GATCTCCATG GGCCTGATCT CGCTGCCCAT CATGCTGCGC
TACGGCTACG ACCGGCGGCT CGCCAGCGGT GTGATTGCCG CATCCGGCAC CCTGGCCCAG
ATCATTCCCC CATCACTGGT GCTGATCCTG ATGGCCGACC AGCTCGGCCG CAGCGTGGGC
GAGATGTACA AGGGCGCATT CGTGCCCGCC TTCATCCTCG TCGGCCTCTA CGTGCTGTGG
GTGGTCATCC TGGCCATCTT CAAGCCCCAG TCCGTACCCG CCCTGCCACC CGAGGCGCGC
ATCTACCGTG AAGACAATGG CAGCTCCGGC TATGCCTCGC TGGCCGTCGT GATGGGCATC
TCCACGGCAG CATCGATCTT CCTGGCCGCT CACATGGCCG ACGTGCATAC GTGGTGGACA
GGCACCGAGG TGCTGGACGT GCCGACCGAT GAGAAGGTCG TCACCGCCAT GTGCGGCGGC
ACCTTCATCG CGTTCGTCAT CGCGAGCATC AACCGCGTGC TCAAGCTGGG CATGCTCTCC
CGTCTGGCCG AGCGCGTGAC CTTCGTGCTG ATTCCGCCAC TGCTGCTGAT CTTCCTGGTG
CTGGGCACCA TCTTCCTGGG CATTGCCACA CCGACCGAAG GCGGCGCCAT GGGTGCCATG
GCGGCGCTGG TCATGGGCTT CGCGCGCCGG CGCCTGGACA TGCCCCTGCT CAAGCAGGCG
CTGGGCGCCA CTACGCGCCT GGCCAGCTTT GTGATGTTCA TCATGATCGG CGCCACCACG
TTCAGCCTGG TGTTCCAGGC GGCAGACGGC CCGAAGTGGG TGGAGCACCT GCTGGCCAGC
CTGCCCGGCG GACAGGTGGG CTTCCTGATC GTGGTGAACC TCATGATCTT CTTTCTGGCT
TTCTTCCTGG ACTACTTCGA GCTGTCCTTC ATCGTGGTGC CGCTGCTGGG ACCCGTCGCC
GACAAGATGG GCATCGATCT GATCTGGTTC GGCGTGCTGC TGGCGATGAA CATGCAGACC
TCGTTCATGC ACCCGCCTTT CGGCTTCGCG CTGTTCTTCC TGCGCTCGGT GGCCCCGGAC
AAGCCCTACA TCGACCGGGT AACGCACAAG GCCATCCAGC CCGTGACCAC CATGCAGATC
TACAAGGGCG CCATTCCCTT CGTTCTGATC CAGCTGATCA TGGTGAGCCT GCTCATCGCC
TTCCCGTCCC TCGTGACGGG CAGCCTGGAC AAAAAGGTGG AAGTGAACAT GGAAGCGGTG
GGCGCGCAAA TGATGGATGC GCTCCAGGAT GCGGAGAGCT ACGGTGCGCC AGGCAACGAC
CCGTTCGCAT CGCAGCCCGC TCCAGACGCC GAGCAGGCAC CGGCACCGGC ACCGGAGGGC
GAGTTGGCGC CCCCTGCCGA CGGCGGCTAC GGCTCGGACG ACCCAGCCAA GGCGCTGCAG
GACGCCATGG GCTCGGGCAG CAAGTAA
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| Protein sequence | MEFITSNYAP VMFGGLIIFL LLGFPVAFSL GACGLLFGFL GIELGVFPSS VMAWLPQRLI
GIMANDTLLA VPFFTLMGLI MERSGMAEDL LDTVGQVFGP LRGGLALAVV FVGALLAATT
GVVAASVISM GLISLPIMLR YGYDRRLASG VIAASGTLAQ IIPPSLVLIL MADQLGRSVG
EMYKGAFVPA FILVGLYVLW VVILAIFKPQ SVPALPPEAR IYREDNGSSG YASLAVVMGI
STAASIFLAA HMADVHTWWT GTEVLDVPTD EKVVTAMCGG TFIAFVIASI NRVLKLGMLS
RLAERVTFVL IPPLLLIFLV LGTIFLGIAT PTEGGAMGAM AALVMGFARR RLDMPLLKQA
LGATTRLASF VMFIMIGATT FSLVFQAADG PKWVEHLLAS LPGGQVGFLI VVNLMIFFLA
FFLDYFELSF IVVPLLGPVA DKMGIDLIWF GVLLAMNMQT SFMHPPFGFA LFFLRSVAPD
KPYIDRVTHK AIQPVTTMQI YKGAIPFVLI QLIMVSLLIA FPSLVTGSLD KKVEVNMEAV
GAQMMDALQD AESYGAPGND PFASQPAPDA EQAPAPAPEG ELAPPADGGY GSDDPAKALQ
DAMGSGSK
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