| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0946 |
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| Symbol | |
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| ID | 7384449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 975019 |
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| End bp | 977166 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643654261 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_002552424 |
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| Protein GI | 222110160 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCTC CCCTTGTTCC CCGCCCGCGG CGCACGGCCG TGGCCCTGGC CGCGCAGGCC
GCGCTGTGGC TGCTGTGCGG CAGCGCGATC GCGCAGACCG CCGAGGCCCC GCCGGGCGCG
CCGGCGGCAA CCGCCACCCC CACCCTGCGC CAGGTAGACG TGGTCGACTC CACGGCGGGC
GCCGCCGCCA CGCCCGCGCG CCGCGCGCAA AGCAGCTCGC GCCTGGGCCT GCCAGTGCTG
GAGACGCCGC GCGCCGTGAG CGTGATCGAC AGCGCGCTGC TGGAGCAGCA GTTGGCCACC
ACGGAGCGCG ACGTGCTGCG CAACGCGGCC GGCGTGTCCT CGCGCAGCGA GTACGCAGGC
TCGTACTCGC AGTTCGCGAT CCGCGGGTTG TGGGCCAACA ACACCTACAA CTACCTGCGC
GACGGTGCCA AGTTCGTGCA CCTGCTCGAC CCACCGCTGT TCAACATCGA ACGCGTCGAG
GTCATCAAGG GCCCGGCCGC GCTGGAGTTC GGCCAGGTGG CGCCGGGCGG CCTCGTCAAC
TACGTGAGCA AGCGGCCCCA GGCCGATCCG CTGCGCAGCG TGAAGATCGG CGCAGGCAGC
CACGGCTGGC GCAATGCCGA ATTCGACCTC ACCGGCCCCC TGAATGCCGA CGGCACGCTG
CGCTACCGGC TGGACGGCAG CGCGAGCCGC GGCGGCAGCT TCGTGGACGG CAACACACCG
CGCAAGCAGG GTCTGGCCGG CAGCCTGGAA TGGCAGCTCA CGCCGGACAC GCGCTGGCGC
GCACAGGCCG AGTACCAAAG CCTGGAAGGC GTATCCACCG TGGGGCTGGC GGTGCCCGAC
CCGCAGAACC CGCGCAGCGC GGACGTGCTC CCGGTGGGCA CCTTCTATGG CGAGCCCTGG
CTGCGCACCG ACGGGCACCT GCGCTTTTAT TCCACGGAGC TGCAGCACCG CTTCACCGAC
AGCCTTGAAG GGCGGGTGCA CCTGTCGCGC AACGAGACCT TTCGCAACGT GAACATGGTC
TACCCCATCG GCCCGGTGAC GGGCGGCCAG GTGGCGCGCA GCTACTGGCT GGCACCGGGG
CAGAACTACA CGTCGGACAC CGCGCTGGCC GAACTGCGCG CACAAGTGCG GACGGGTCCC
GTGCGCCACA CGCTGCTCGC CGGGCTGGAT TGGCGTGCCA TCGAGGGCGT GTACGGTGCG
CGTGGCACGG GCAACCTGGG TGCAGTGGAC CTGTACCAGC CCGTGACGGG CCTGGTGCCG
CCCGCGGCTT CCGGCGGCAG CGCCGCCGTG GCCTCGGACA CGCGCAACAC GGGCCTGTTC
GTGCAGGACC GGCTCGCCCT GGGCGACTTC AGCCTGCTGC TGGGCCTGCG CCACGACCGG
CTCAAGGACG CTTACACCAA GCCCGCCACG GATCTGAGCA AGACCCAGCC CAGCGCCGCG
CTGAGCTGGC AGCCCCTGCC CGCCAGCATG TTCTATGTGA GCCATGCGCG CTCGTTCCAG
GCGAACTCGG GCACGCTGCT GTGGGGCGAC CGCGCGGCAC CGCCTTCCGA GGGCAAGCAG
TTGGAGGTGG GCTGGAAGCA GGAATGGCTG GGCCAGCGCC TGCTCACCAC CGTGTCGGCC
TTCGCGCTGG AACTGACCAA CGCACCGGCC AACGACCCCG AGCACCCCGG CTACTCGGTG
CTGACAGGCC GCCAGCGCAT CAAGGGGCTG GAAGTGGAGG CCCAAGGCCG CATCACCCCG
GGCTGGAGCG TCACCGCGCA GGCCACCTTC CTCGACCCCA AGGTGCTGGC CGACACCGTG
CCCGGCGCCA ACGTGGGCCA CCGCGTCGCC CTCGCCCCGC GGCGCACCGC CTCGCTGTGG
ACCCAGTACC GCCTGCCCCG GGTGCCCGGC CTGTGGGTCG GCGGCGGGCT GGTCCACCAG
GGCGACAAGT TCACCGCCAA CGACAACCGG TGGCGCCTGC CCGGCTACAC CGTGGTGGAC
CTCGCGCTGG GCTACCAGTT CGGCGGCGGC GTGCGACTGC AAGCCAACCT GAAGAACGCC
GCCAACCGGC GCTACTACGT GGACGCATCC ACCACGGCCG CGGGCTTTGC GGCCGTCACA
CCGGGCGAGC CGCGCTCGCT CTACGTCACG CTGGACTACA CGTTCTGA
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| Protein sequence | MKPPLVPRPR RTAVALAAQA ALWLLCGSAI AQTAEAPPGA PAATATPTLR QVDVVDSTAG
AAATPARRAQ SSSRLGLPVL ETPRAVSVID SALLEQQLAT TERDVLRNAA GVSSRSEYAG
SYSQFAIRGL WANNTYNYLR DGAKFVHLLD PPLFNIERVE VIKGPAALEF GQVAPGGLVN
YVSKRPQADP LRSVKIGAGS HGWRNAEFDL TGPLNADGTL RYRLDGSASR GGSFVDGNTP
RKQGLAGSLE WQLTPDTRWR AQAEYQSLEG VSTVGLAVPD PQNPRSADVL PVGTFYGEPW
LRTDGHLRFY STELQHRFTD SLEGRVHLSR NETFRNVNMV YPIGPVTGGQ VARSYWLAPG
QNYTSDTALA ELRAQVRTGP VRHTLLAGLD WRAIEGVYGA RGTGNLGAVD LYQPVTGLVP
PAASGGSAAV ASDTRNTGLF VQDRLALGDF SLLLGLRHDR LKDAYTKPAT DLSKTQPSAA
LSWQPLPASM FYVSHARSFQ ANSGTLLWGD RAAPPSEGKQ LEVGWKQEWL GQRLLTTVSA
FALELTNAPA NDPEHPGYSV LTGRQRIKGL EVEAQGRITP GWSVTAQATF LDPKVLADTV
PGANVGHRVA LAPRRTASLW TQYRLPRVPG LWVGGGLVHQ GDKFTANDNR WRLPGYTVVD
LALGYQFGGG VRLQANLKNA ANRRYYVDAS TTAAGFAAVT PGEPRSLYVT LDYTF
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