| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0943 |
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| Symbol | |
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| ID | 7384446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 969710 |
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| End bp | 971164 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643654258 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002552421 |
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| Protein GI | 222110157 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGG AATTCCCCAT GACGATGCTT TCCCTTGCTT TCCCCGCGCG ACTGGCGCCG
CTGGCCGCGG CCCTGGTGCT GGCAGGCTGC ATGGGCGCGC CGCTGGCGCC GCAGCCGGAA
CACGCGGGCG TTGCCGTGCC CGCCGCCTTC AGCGCAGCGG CGACGGAGGG TGCACCGGCC
TGGACGACCG CGCCGCCGGC GGAGGCACAG CCCCGCGGCG CCTGGTGGCT GGGTTTTCAG
GATCCGGTGC TGAGCGATCT GGTCGAACGC GCTGGTCAGG CCAATACCAG CGTGCAGGAG
GCTGCGGCCC GCCTGGCCGA GGCGCGCGCG CTGCTGCGCT CGGCAGATGC AGAGCGCGCA
CCCCAGGTGC GCGCCAACGC TGGCGTCTCA CGCCAGGCCG GTGTGACCAC CACCAATGGC
ACGCAGCCTG CCACGCTCGC AACGGCGGGG CTGGGCGTGT CCTACGAGCT GGATCTGTTC
GGCCGGCTGG CGCGCGCCAG CGATGCGGCG CGGCTGGACG CCCAGGCCCG CGCCGCGCTG
CTGCAGAGCA CGCGGCTGAT GGTGCAGGCC GACGTAGCGC AGACCTATTT GCAATTGCGT
GCGCTGCAGG CGGAGCGCGC GCTGGTGGAT GAGAGTCTGG AAGCCTACCG CGGCACTCTG
TACCTCACGC AGCGCCGCTA CCAGGCGGGC GACGTGGCGG AGCTGGACGT GGCGCGCGTG
CAGACGGAGG TGGCGGCCAC CGAATCCGAG GCACTGGCGC TGGAGCGCCA GCAGGCGCAG
CTGCGGCATG CATTGGCCGT GCTGGTGGGC GACGTGGCCA CGGGCTTCTC GCTGCCACCG
GCGGCGGTCG AGGCCGCGCT GCCGGTGATT CCGCCCGGCG TGCCCAGCAC GGTCCTGGCG
CGCAGGCCCG ACGTGTCTGC GGCCCAGGCC GCGGTGCTGG CGGCGCAGGC ACGCGTGGGC
GTGGCGCAGG CGGCGTGGTT TCCCGCGCTG GCACTCACGG GCAGTGCGGG CTTTGCATCG
CCCGAGCTGG GCGATCTGTT CAAGTGGTCG GCGCGTTCCT GGGGCATTGG CATGCTGCTG
TCGCTGCCGC TCTTCGATGG CGGCCAGCGC GCCGCCCAGG AGGAGGGTGC GCGCGCCCGG
CTGGAAGGGG CGCTCGCCGC CCACCGCGGC CAGGTGCTCA CGGCCTTTCG CGAGGTGGAA
GACCAGCTCA GCGCGCTGCG CCTGCTGGCC GACCAGGCGC AGGCACAGGA CCGCGCCGTG
CAGTCCGCCG CGCGCGCTAC GCAGCTGTCC GATTCGCGCT ACCGCAACGG TCTGGTGAGC
CAATTGGAGT TGCTGGATGC GCGCCGCAGC GAGCTGCGCA ACCGCCGGCA GGCGCTGCAG
GTGCGCACAG CGCAGTACGT GGCCACGGTG GGCTTGGTAC GCGCGCTGGG CGGGGGTTGG
GATACCACCA GCTGA
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| Protein sequence | MKKEFPMTML SLAFPARLAP LAAALVLAGC MGAPLAPQPE HAGVAVPAAF SAAATEGAPA
WTTAPPAEAQ PRGAWWLGFQ DPVLSDLVER AGQANTSVQE AAARLAEARA LLRSADAERA
PQVRANAGVS RQAGVTTTNG TQPATLATAG LGVSYELDLF GRLARASDAA RLDAQARAAL
LQSTRLMVQA DVAQTYLQLR ALQAERALVD ESLEAYRGTL YLTQRRYQAG DVAELDVARV
QTEVAATESE ALALERQQAQ LRHALAVLVG DVATGFSLPP AAVEAALPVI PPGVPSTVLA
RRPDVSAAQA AVLAAQARVG VAQAAWFPAL ALTGSAGFAS PELGDLFKWS ARSWGIGMLL
SLPLFDGGQR AAQEEGARAR LEGALAAHRG QVLTAFREVE DQLSALRLLA DQAQAQDRAV
QSAARATQLS DSRYRNGLVS QLELLDARRS ELRNRRQALQ VRTAQYVATV GLVRALGGGW
DTTS
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