| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0941 |
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| Symbol | |
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| ID | 7384444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 965192 |
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| End bp | 966451 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643654256 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002552419 |
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| Protein GI | 222110155 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.35175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTCAC CATTTTTCTC GTCGTCCCGT CGCCGCTGGT GGACCGCCGC CGGCGTGTCC
CTTGCCGTGG CCGTAGCCGG GGGAACCGTG CTGGGCCTGC AAAGTTCGCA TGCCGAGGCG
CCCGCCGCTG GCACGGCCCC GCAGGCCATG CCGGTCTCTG TGGCGGCCGT GCTGCAGCAG
GACATTGCGC TGTGGGACGA GTTCTCCGGC CGGCTGGAAG CCGTGCAGCG CGTGGACATT
CGCCCCCGTG TGGCGGGCGC CGTGCAGGCG GTGCATTTCC GCGAGGGCGC ACTGGTGAAG
CAGGGCGACC TGCTCTTCAC CGTGGACCCT GCGCCCTACG CGGCCGAGGT GGACCGTGCG
GAGGCACAGG TCGTCGCCGC GCAGGCCCGC GTGTCCTACA CCCGCAGCGA GATGGAGCGC
GCCACGCGCC TGTGGGAAGA GCGCGCCATT GCCCAGCGCG AGCACGACGA GCGTGCCAAC
GCCCAGCGCG AGGCCGAGGC CAACCTGCGC GCGGCCCAGG CGGCGCTGCA GACCGCGCGG
CTGAACTTGG GCTACACGCA GGTGCGCGCG CCCGTCGCGG GGCGGGTGGG CCGCATCGAG
GTCACGGTGG GCAACTTGGT GGCGGCGGGG GCCGGCGCGC CGGTGCTTAC CACGCTGGTC
TCGGTGAGCC CGATCTATGC GAGCTTCGAC ACTGACGAGC AGGTGGTTGC GCGTGCGCTG
GAAGACCTGC GCACCAGCAC GCGCTCCAGT GGCAACGCAC GTGCCGCGGT GGACCGCATA
CCGGTGCAGA TGGGCACGGG CACCACGGGT GGCACGCCGC ACGTGGGGCA CCTGCAACTC
ATCGACAACC AGGTGGACGC CCGCAGCGGC ACGGTGCGCG TGCGCGCGGT GTTCGACAAC
GCCGACGGCA CGCTCATGCC GGGCCAGTTC GCACGCATCC GCATGGGCCA GGCGCACCGC
TCCTCGGCCG TGCTCATCAA CGAGCGCGCC GTGGGCACGG ACCAGAACAA GAAGTTCGTG
ATGGTGGCGG GCGAGGGCGA CAAGGCCGAA TACCGCGAAG TGCACCTGGG GGTGCACGTG
GATGGGCTGC GCGTCGTCAC CTCGGGCCTC AAGGCTGGCG AGCGCATTGT CGTGAATGGC
CTGCAGCGCG TGCGCCCCGG CGTGCAGGTG GCGCCGCAGG AGGTGCCCAT GGCCGCCAAG
GCCGAACTGG ACGGCAACGG CGCGCAGGCG CGCGCCACGC CCAAGCAGCC CGCTGCCTGA
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| Protein sequence | MNSPFFSSSR RRWWTAAGVS LAVAVAGGTV LGLQSSHAEA PAAGTAPQAM PVSVAAVLQQ
DIALWDEFSG RLEAVQRVDI RPRVAGAVQA VHFREGALVK QGDLLFTVDP APYAAEVDRA
EAQVVAAQAR VSYTRSEMER ATRLWEERAI AQREHDERAN AQREAEANLR AAQAALQTAR
LNLGYTQVRA PVAGRVGRIE VTVGNLVAAG AGAPVLTTLV SVSPIYASFD TDEQVVARAL
EDLRTSTRSS GNARAAVDRI PVQMGTGTTG GTPHVGHLQL IDNQVDARSG TVRVRAVFDN
ADGTLMPGQF ARIRMGQAHR SSAVLINERA VGTDQNKKFV MVAGEGDKAE YREVHLGVHV
DGLRVVTSGL KAGERIVVNG LQRVRPGVQV APQEVPMAAK AELDGNGAQA RATPKQPAA
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