| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0906 |
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| Symbol | |
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| ID | 7384409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 929699 |
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| End bp | 930970 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643654221 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_002552384 |
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| Protein GI | 222110120 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.3977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAACC CCACACCTCC CGCTTCTCCG CCGGCGGCCG GCGCCTCCCA GGCTGGCAGC
ACCGGCTCCA TGATCGCCCG GCAGGCCATC ATGAACGGCC AGCAGGCGGT CGTCGGCTAC
GAACTCTTCA ACCGCTCGCG CTCCACCGTC GGCCACACGG CCGCCAGCGA TGTGATCCTG
GTCTTCACCG CGCTGTCGCA TGCGGGCACC GAAGAGCTGG TGGGCAAGAT GCTGATTTTC
GTGAACTGCA CCCACGAAAG CCTGACGGGC GGGCACCTGG AACTGGTGAA CCCCGACAAG
GTGGTGCTGG AGATCCCTCC GCTGGGCCAC GTGGCCGCGG CCGAAGTGCA TGCGCGGCTT
CCCATCCTGC AGGCGCTGCG CAGCCGCGGC TTTCACCTCG CCTTCAACCA CACGGTGCTG
GAATCCACCT ACGCGCCCTG GCTGCCGCTG GCCGACTACA TCAAACTCGA CATGTCGGTG
CTTGCGCGCG ACCAGCTCGC GGTGCTGATC AACTACGCGG GGCGCCATTC CCAGGCCGAA
CTGATCGCGG AAAAGCTCGA AACCGCGCAA CAGTACGACA TGGTGTCGTC CATGGGCGTG
GAAATGTTCC AGGGCTACTG GTTCTCGCGT CCCACGCTGG TGGAGGCCAA ACTGCTCACC
CCCGGCCAGG CGAGCATCGT GCAGCTGCTC AACCTGGTGC GCAGCCAGGC CAGCACCGAC
GAGATCGAAG AGGTTCTCAA AAAGGATGCT GGGCTGGCCT TCAACCTGAT GCGCCTGATC
AACTCCGCGG GGCTGGGCAT GACGCGCGAG ATCACCTCCT TTCGCCAGGC GGTGCTGCTG
CTGGGACTCA AGAAGCTGTT CCGCTGGGCC GCCCTGCTGC TCACGGCGGT GCGCAGCGGC
GGTACGCCCC CGGCCGTGGG ACAGACGGCC GTGGTGCGCG GCCGCCTCAT GGAACTGCTG
GCCCAGGAAT TTCTGCCCGC CGAAGAAGCC GACCAGGCGT TCGTGATCGG CATCTTCTCC
ATGCTGGACC AGATGCTCGG CATGCCGCTG GCCTCCGCCG TGGGGCTGCT CAACCTGCCC
GAAGAGCTAT CCACCGCCCT GCTACAACGC AGCAACGTGT ACGGCCAGCT GCTGACACTG
GCCGAAGCCT GCGAGACCAG CGACGACCAC ACCTTCGACC AGATCGCCCA ATCGCTCCAC
CTGACGAACC AGCAGATCAA CTGGGCCCAC TTGCAAGCCC TGGCCTGGGC GGACCAGATG
GCGCCCGCCT GA
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| Protein sequence | MTNPTPPASP PAAGASQAGS TGSMIARQAI MNGQQAVVGY ELFNRSRSTV GHTAASDVIL
VFTALSHAGT EELVGKMLIF VNCTHESLTG GHLELVNPDK VVLEIPPLGH VAAAEVHARL
PILQALRSRG FHLAFNHTVL ESTYAPWLPL ADYIKLDMSV LARDQLAVLI NYAGRHSQAE
LIAEKLETAQ QYDMVSSMGV EMFQGYWFSR PTLVEAKLLT PGQASIVQLL NLVRSQASTD
EIEEVLKKDA GLAFNLMRLI NSAGLGMTRE ITSFRQAVLL LGLKKLFRWA ALLLTAVRSG
GTPPAVGQTA VVRGRLMELL AQEFLPAEEA DQAFVIGIFS MLDQMLGMPL ASAVGLLNLP
EELSTALLQR SNVYGQLLTL AEACETSDDH TFDQIAQSLH LTNQQINWAH LQALAWADQM
APA
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