| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0905 |
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| Symbol | |
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| ID | 7384408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 928353 |
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| End bp | 929648 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643654220 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_002552383 |
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| Protein GI | 222110119 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAGCC ATTCAGACAC CGCCGCACAG CTCCCCGCCG ATTCCGCCCA GCCGTCACCC
GAGGCCACTG AGGCGCAGAA CCAGGTCGTC ATCGCACGAC AGGCCATCCT CGACGAACAG
CGCACCGTCT TTGGCTACGA ACTGTTCGAC CGGTCCACCG CCGCGGACGC GCACACCGCC
GCCAGCGATG CGGCGCTGCT GTTCAACGCG CTGTCGTATG CGGGCTCCGA GGCGCTGGTG
GGCAAGAAAA CCGTCTTCAT CAATTGCACG CACGACAGCC TGGCCGGCGG ACACCTGGAG
CTGATCCACC CTGAAAAAGT GGTGCTGGAA GTACCCACGC TCGGCGCCCA GGCCACGGCC
GAGCAGATCG AGCAGTACAT CCCCACGCTG CAAGCGGTGC GCACGCGCGG CTTTCGGCTG
GCCTTCAGCC AGGACGTGCT GCGGCGCGCC TACAGCAGCT GGGTGCCTCT GGCCTCGTTC
ATCAAGCTGG ACATGCAGGC CTTCAAGCCG GAGCTCGCCG AGCCGCTCGT GAAGTTCGCC
CAAGCCCACT CGCAGGCCAC CCTGGTGGCC GAGAAGGTAG AAACGGCCGA ACAGTACCAG
CGCATGGCTT CGCTGGGCGT GAAGCTGTTC CAGGGCTACT GGTTCGCACA GCCCTCGCTG
GTCAAGGCGC AAACCATCCG TCCCTCGCAG GCGACCATCA TCCAGCTCAT CAACCTGGTG
CGCCAGCAGG CCAGCACCGG AGAAATCGAG GAGCTGCTCA AGAAGGACCC CACGCTGTCC
TTCAACCTGC TGCGTTTCAT CAATTCCTCG GGCTTCGGCC TGTCGTGCGA GGTGACCTCG
TTCCGTCACG CGGTGATGAT CCTGGGCCTG AAGAAGCTGT TCCGCTGGGC GGCGCTGTTG
ATGACGACCT CGCGCGCCAG CGGCTCGCCG CCCGCCGTGG GCCAGACGGC CGTGGTGCGC
GGCCGCCTCA TGGAACTGCT GGCCGCCGAG CTGCTGCCCC CCGAGGAATG CGACAACGCC
TTCGTGGTGG GGGTCTTCTC GCTGCTGGAT GCGATGCTGG GCGTGCCGCT GGAGCGCGCC
CTGGAAACGG TGGCCCTGCC CCAGCCGGTG CTTGACGCAC TGCTGCACAA CAAGGGCGTG
TTCGCCCCCT TCCTGGAGCT CACCAAGGCC TGCGAAAGCG GTGACGACGA GGCTTTCGCG
CGCACGGCCG AAGCGCTGCA CCTGTCCAAC CGCCAGGTCA ACTGGGCCCA CCTGCAGGCA
CTGGCCTGGG CCGAGAGCCT GACGGCCGAC GAATAA
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| Protein sequence | MSSHSDTAAQ LPADSAQPSP EATEAQNQVV IARQAILDEQ RTVFGYELFD RSTAADAHTA
ASDAALLFNA LSYAGSEALV GKKTVFINCT HDSLAGGHLE LIHPEKVVLE VPTLGAQATA
EQIEQYIPTL QAVRTRGFRL AFSQDVLRRA YSSWVPLASF IKLDMQAFKP ELAEPLVKFA
QAHSQATLVA EKVETAEQYQ RMASLGVKLF QGYWFAQPSL VKAQTIRPSQ ATIIQLINLV
RQQASTGEIE ELLKKDPTLS FNLLRFINSS GFGLSCEVTS FRHAVMILGL KKLFRWAALL
MTTSRASGSP PAVGQTAVVR GRLMELLAAE LLPPEECDNA FVVGVFSLLD AMLGVPLERA
LETVALPQPV LDALLHNKGV FAPFLELTKA CESGDDEAFA RTAEALHLSN RQVNWAHLQA
LAWAESLTAD E
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