Gene Dtpsy_0898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_0898 
Symbol 
ID7384401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp921164 
End bp922615 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content72% 
IMG OID643654213 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_002552376 
Protein GI222110112 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATG CCCGCCGCCC TTCCCCCCTT CACAGCCGCC GCACCCTGCT GCGCGCGGGT 
AGCCTGGTAC TGCTGCTGGG CACGCAGCAG ATCGCACGCG GCGCCACCAT CGTCGCGGTG
CGTGTCTGGC CCGCGCCCGA CTATTCACGG GTGACCATCG AATCGGACCG CGCGCTCACG
GCCCGCCAGA CCTTCGTGGA CACGCCGCCG CGCCTGGCGG TGGACATCGA GGGCATCGAC
CTCAACCCCT CGCTGCGCGA ACTGGTCGCC AAGGTGCGCG CAGACGACCC CAACATCGCC
GGCATCCGCG TGGGCCAGAA CGCGCCCGGC GTGGTGCGCC TGGTGGTGGA CCTGAAGCAG
GCGGCGCGGC CGCAGGTCTT CACGCTGCAG CCCGTGGCCG CGTACCAGCA CCGGCTGGTG
TTCGACCTGT ATCCCGCGCA GCCGCCCGAC CCGCTGGAGG CACTGATCGC CGAGCGGCTG
CGCGACGCCA CCGCGCCGCT GCCCGGCAGC GCAATAGGTA CAGGGCGCGC CATGGCGGCT
CCCCCATTGA CGGACCCGCT GGGTGACCTG ATTGCACGGC ATTCCGCACC GCAGGCCATG
CCCCCTGCCC TGCCCGTGCC GGGCACGGCG GTGGCAACCG CACCCGTGGC GCCGGCACCC
GCCGCCCCGG CGCGCCCTGC CGCACCCGCC ACCCCGCCTA CGACGGCCCG CGCGGCGTAT
TCCACCGACC GCCTCATCAT CATCGCGCTG GACCCCGGCC ACGGCGGCGA AGACCCGGGC
GCCATCGGCC CGCGCGGCAC GCGCGAAAAG GACGTGGTGC TGAAAGTGGC GCACCTGCTG
CGCGACCGCA TCAATGCCAC GCAGGTGGGC GGCAATCCCA TGCGCGCCTT TCTCACGCGC
GACGGTGACT TCTTCGTCCC GCTAGCGGCG CGCGTCGACA AGGCGCGGCG CGTGCAGGCA
GACCTGTTCG TGTCCATCCA CGCCGACGCC TTCACCACCC CGTCGGCACG CGGCGCCAGC
GTGTTCGCGC TGAGCCAGGG CGGCGCGTCC AGCTCGGCCG CGCGCTGGCT GGCCAACAAG
GAGAACGAGG CCGACCTGAT CGGCGGCGTG AACCTGGGCG CCCAGCAGGA CCGCCATGTG
CAGCGCGCGC TGCTGGACAT GAGCACCACG GCGCAGATCA ACGACAGCCT GAAGCTCGGC
AGCGTGCTGC TGGGCGAGAT CGGCAGCATG GCCAAACTGC ACAAGCCGCG CGTGGAGCAG
GCGGGCTTTG CCGTGCTCAA GGCGCCCGAC ATTCCCAGCG TGCTGGTGGA GACGGCCTTC
ATCAGCAACC CCGAGGAAGA GTCCAAGCTG CGGTCCGCCG CGTATCAAGA GCAATTGGCC
GACGCGCTGA TGCGCGGCAT CGTCCGATAC TTCGCGAAAA ACCCGCCGCT GGCGCGCAGC
CGCACCGTCT GA
 
Protein sequence
MSDARRPSPL HSRRTLLRAG SLVLLLGTQQ IARGATIVAV RVWPAPDYSR VTIESDRALT 
ARQTFVDTPP RLAVDIEGID LNPSLRELVA KVRADDPNIA GIRVGQNAPG VVRLVVDLKQ
AARPQVFTLQ PVAAYQHRLV FDLYPAQPPD PLEALIAERL RDATAPLPGS AIGTGRAMAA
PPLTDPLGDL IARHSAPQAM PPALPVPGTA VATAPVAPAP AAPARPAAPA TPPTTARAAY
STDRLIIIAL DPGHGGEDPG AIGPRGTREK DVVLKVAHLL RDRINATQVG GNPMRAFLTR
DGDFFVPLAA RVDKARRVQA DLFVSIHADA FTTPSARGAS VFALSQGGAS SSAARWLANK
ENEADLIGGV NLGAQQDRHV QRALLDMSTT AQINDSLKLG SVLLGEIGSM AKLHKPRVEQ
AGFAVLKAPD IPSVLVETAF ISNPEEESKL RSAAYQEQLA DALMRGIVRY FAKNPPLARS
RTV