Gene Dtpsy_0881 details

Gene Information

• Locus tag: Dtpsy_0881
• ID: 7383579
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 904994
• End bp: 905659
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643654196
• Product: NADH-ubiquinone/plastoquinone oxidoreductase chain 6
• Protein accession: YP_002552359
• Protein GI: 222110095
• COG category: [C] Energy production and conversion
• COG ID: [COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J)

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACGCCA AAACCGGTTT CTTCTACTTG TTCTCGGTAG TGCTGCTGTA CGCGGCCTTC 
CGGGTCATCA CGGCGCGCAA CCCCGTGCAT GCCGTGCTGC ATCTGATTCT TGCCTTCTCG 
CAGGCCGCCG GCGTGTGGTT TCTGCTGAAG GCGGAATTCC TCGCCATCAC GCTGGTGCTC 
GTCTACCTGG GCGCCGTGAT GGTGCTGTTC CTCTTTGTCG TGATGATGCT GGACATCCGC 
ATCGATACCG TGCGACGCGG TTTCTGGAAG CACTTTCCTT TGGCGGCATT CATCGGTGCC 
CTGGTGGCAT TCGAGATGGC CGCTGTGCTC ATGACTGGTT TTCGCGGCAT CGAAGAGCCC 
AAGGCCGTTG AAGTGCTGGT GAATGCTGCG GGGCAGGTGG TGCCTTACTC GAACACCAAA 
GCCTTGGGCA AACTGCTCTA CACAGAGTAC CTGTACCCCG TTGAAGTGGC TGCGGTGATC 
CTGCTGGTGG CCATGATTGC AGCCATCGCC CTGACCTTGC GCCAGCGCAA GGACTCCAAG 
GCCATTGACC CTTCGGAGCA GGTGCGCGTG CGTGCCCGTG ATCGCCTTGT CATGGTCCAG 
TTGCCCGTCA CGCAGCAGGC CGCTGCGCCA GCAGTCCCCG AGTCTGCAGA GGAGAAGAAG 
CAATGA 

 

Protein sequence

MDAKTGFFYL FSVVLLYAAF RVITARNPVH AVLHLILAFS QAAGVWFLLK AEFLAITLVL 
VYLGAVMVLF LFVVMMLDIR IDTVRRGFWK HFPLAAFIGA LVAFEMAAVL MTGFRGIEEP 
KAVEVLVNAA GQVVPYSNTK ALGKLLYTEY LYPVEVAAVI LLVAMIAAIA LTLRQRKDSK 
AIDPSEQVRV RARDRLVMVQ LPVTQQAAAP AVPESAEEKK Q