| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0877 |
|---|
| Symbol | |
|---|
| ID | 7383575 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 899842 |
|---|
| End bp | 901203 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643654192 |
|---|
| Product | NADH-quinone oxidoreductase, F subunit |
|---|
| Protein accession | YP_002552355 |
|---|
| Protein GI | 222110091 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
|---|
| TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGG CTGCACAAGT GCTGTCGCAG TTTCAGGCGA CGGGCGTACA GACCTGCTTC
CATGACCGCC ATATCAATCC GCAGATCTAT GCGGGCTTGA ACGGCAGCAA CTGGAGCCTC
AAGGATTACG AGGCCCGGGG AGGCTACCAG GCCCTGCGCA AGCTGCTGGG CAAGGATGGT
GGTGAAGGCC TGACCCAGGA CCAGGTGATC GCCACCATGA AGGAATCCGG TCTGCGCGGC
CGTGGTGGTG CGGGCTTCCC GACTGGCCTG AAGTGGAGCT TCATGCCGCG TCAGTTCCCT
GGCCAGAAAT ACTTGGTCTG CAATTCCGAC GAGGGGGAGC CGGGCACGTG CAAGGATCGC
GACATCCTGA TGTACAACCC GCACATCGTG ATCGAGGGCA TGATCATCGC GGCCTACGCG
ATGGGCATCT CTGTGGGCTA CAACTACATC CACGGCGAGA TCTTCCAGGT CTACGAGCGC
TTTGAAGCGG CGTTGGAAGA GGCGCGCGCT GCAGGCTATC TGGGTGACAA CATCCTGGGC
AGCAGCTTCA GCTTCCAACT GCATGCGCAC CATGGCTTTG GGGCGTATAT CTGCGGTGAG
GAAACCGCGT TGCTGGAATC GCTGGAAGGC AAGAAGGGCC AGCCGCGCTT CAAGCCGCCA
TTCCCGGCCA GCTTTGGCCT GTACGGCAAA CCCACCACGA TCAACAACAC CGAGACGTTC
GCCGCGGTGC CGTGGATCAT CCGCAATGGC GGTCAGGCTT ACCTTGAGTG CGGCAAGCCC
AACAACGGCG GCACCAAGAT CTTCTCGGTG TCCGGCGACG TAGAGCGTCC AGGCAACTAT
GAAGTGCCCT TGGGCACGCC ATTTGCCAAG CTGCTGGAAC TGGCGGGTGG CGTGCGCAAG
GGTCGCCAGC TCAAGGCGGT GATTCCGGGT GGTTCTTCCG CTCCCGTGTT GCCGGCGTCC
ATCATCATGG AATGCACGAT GGACTACGAC TCCATCGCCA AGGCCGGCTC CATGCTGGGC
TCGGGCGCCG TGATCGTGAT GGACGATTCC CGCAACATGG TGGAGAGCCT GCTGCGTCTG
TCGTATTTCT ACGCGCATGA ATCCTGCGGT CAGTGCACAC CCTGCCGCGA AGGCACGGGC
TGGATGTGGC GCGTGATCAA TCGTATCCAG CACGAAGCCG GGCGGGAGAG CGATCTGGAC
CTGCTCAATT CCGTCGCGGA CAACATTCAG GGCCGGACCA TCTGCGCGCT GGGCGATGCG
GCAGCCATGC CGGTGCGCGC CATGCTCAAG CATTTCCGTC CGGAGTTTGA AGCGCTGATC
CGAAACGCCC ACCCATCGGG TTCCACCCCC GCCAGCGCCT GA
|
|---|
| Protein sequence | MTTAAQVLSQ FQATGVQTCF HDRHINPQIY AGLNGSNWSL KDYEARGGYQ ALRKLLGKDG
GEGLTQDQVI ATMKESGLRG RGGAGFPTGL KWSFMPRQFP GQKYLVCNSD EGEPGTCKDR
DILMYNPHIV IEGMIIAAYA MGISVGYNYI HGEIFQVYER FEAALEEARA AGYLGDNILG
SSFSFQLHAH HGFGAYICGE ETALLESLEG KKGQPRFKPP FPASFGLYGK PTTINNTETF
AAVPWIIRNG GQAYLECGKP NNGGTKIFSV SGDVERPGNY EVPLGTPFAK LLELAGGVRK
GRQLKAVIPG GSSAPVLPAS IIMECTMDYD SIAKAGSMLG SGAVIVMDDS RNMVESLLRL
SYFYAHESCG QCTPCREGTG WMWRVINRIQ HEAGRESDLD LLNSVADNIQ GRTICALGDA
AAMPVRAMLK HFRPEFEALI RNAHPSGSTP ASA
|
|---|
| |