| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0865 |
|---|
| Symbol | |
|---|
| ID | 7383561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 889985 |
|---|
| End bp | 890545 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643654178 |
|---|
| Product | transcription elongation factor GreB |
|---|
| Protein accession | YP_002552343 |
|---|
| Protein GI | 222110079 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0782] Transcription elongation factor |
|---|
| TIGRFAM ID | [TIGR01461] transcription elongation factor GreB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.494541 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGG CATTCACCAA GGAAACAGAT ACCGACGACG AACCGTCCCT CCCCCCGCAA
GCGCCCGTGG GGGCCAGCAA GAACTACATC ACACCCCAGG GATATGCGCG CCTTCGCCGC
GAGTTGCTGG ACCTTATCGA TGATGAGCGC CCCAAGGTGG TAGAAATTGT CCATTGGGCC
GCCAGCAACG GAGACCGCTC GGAGAACGGC GACTACCTGT ACGGCAAGAA AAGGCTGCGT
GAGATCGACA GGCGCATCCG TTTCCTGACG AAACGGTTGG AAATCGCGGA TGTCGTGGAC
CCATCGGTAC ACACGGGTAG TGACCAAGTC TTCTTCGGCG CCACGGTCAC CTACGCCGAG
GAGGACGGTG TGGAGCGCAC GGTGACGATT CTGGGCATTG ACGAAGCCGA CAACAGCCTG
CAGCAGATCA GCTGGATTTC TCCCGTGGCA CGCGCGCTGC TCAAAGCCCG GGAGGGAGAC
GAAGTGACCC TGCAGACTCC CGCCGGCCTA CGTACCCTGG AAATCCTGCG TGTCGAATAC
CCTGTCGCGG CGCCTCGGTG A
|
|---|
| Protein sequence | MSKAFTKETD TDDEPSLPPQ APVGASKNYI TPQGYARLRR ELLDLIDDER PKVVEIVHWA
ASNGDRSENG DYLYGKKRLR EIDRRIRFLT KRLEIADVVD PSVHTGSDQV FFGATVTYAE
EDGVERTVTI LGIDEADNSL QQISWISPVA RALLKAREGD EVTLQTPAGL RTLEILRVEY
PVAAPR
|
|---|
| |