| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0803 |
|---|
| Symbol | aspS |
|---|
| ID | 7383743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 835057 |
|---|
| End bp | 836868 |
|---|
| Gene Length | 1812 bp |
|---|
| Protein Length | 603 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643654115 |
|---|
| Product | aspartyl-tRNA synthetase |
|---|
| Protein accession | YP_002552282 |
|---|
| Protein GI | 222110018 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0173] Aspartyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.979885 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATGC GCTCCCACTA CTGCGGTCTT GTGACCGAAG CCCTCCTGGG CCAAACCGTC
ACCCTGTCGG GCTGGGTGAA CCGTCGCCGC GACCATGGCG GCGTGATCTT CATCGACCTG
CGCGACCGCG AAGGCTATGT GCAGGTGGTT TGCGACCCTG ACCGTCCCGA GATGTTCAAG
GTGGCCGAGG ACGTCCGTAA CGAGTTCTGC GTGCAGGTCA AGGGTTTGGT GCGCGCGCGC
CCCGAAGGCA CGACCAACGA CAGCCTCAAG AGCGGCAAGA TCGAGGTGCT GTGCCAGGAG
CTCAACGTCC TGAACCCGTC CGTGACGCCG CCCTTCCAGA TGGACGACGA CAACCTGTCG
GAAACCACGC GCCTCACGCA CCGCGTGATG GACCTGCGCC GCCCGTACAT GCAGCGCAAC
ATGATGCTGC GCTACAAGAC GGCCATCCAG GTGCGCAACT TCCTGGACAA GGAAGGCTTC
ATCGACATCG AAACGCCCAT GCTGGGCAAG AGCACGCCCG AGGGGGCGCG CGACTACCTC
GTGCCCAGCC GCGTGCACGA CGGCCAGTTC TTCGCGCTGC CGCAGTCGCC CCAGCTCTAC
AAGCAGATGC TGATGGTGGC CGGCTACGAC CGCTACTACC AGATCACCAA GTGCTTCCGC
GACGAGGATC TGCGCGCCGA CCGCCAGCCC GAGTTCACGC AGATCGACTG CGAGACCTCG
TTCCTGAACG AGGAAGAGAT CCGCGCCATC TTCCAGCGCA TGATCAAGGA AGTGTTCCAG
CAGCAACTGG GCGTGGACCT GGGTGAATTC CCCACCATGA CCTACCAGGA AGCAGCGCAC
CGCTTCGGCT CCGACAAGCC TGACCTGCGC GTGAAGCTCG AATTCACCGA GCTGACCGAT
GTCATGAAGG ACGTGGACTT CAAGGTCTTC TCCGGCGCCG CCAACATGAA GGGCGGCCGT
GTGGTGGCCC TGCGCGTGCC CGGTGGCGCC CGTGAAGAGG GCGGCCTGTC GCGCGGCGAG
ATCGACGGCT ATACCGAGTT CGTGAAGATC TACGGCGCCA AGGGTCTGGC TTACATCAAG
GTCAACGACA AGGCCAAGGG CCGTGACGGC CTGCAGTCGC CCATCGTCAA GAACATCCAT
GACGCCGCAC TGGCCGAAGT GCTCCAGCGC ACGGGCGCAC AGGACGGCGA CCTGCTGTTC
TTTGGCGCCG ACAAGGAAAA GATCGTCAAC GACGCCATCG GCGCACTGCG CCTGAAGGTC
GGCCACAGCG AATTCGGCAA GAAGAATGGT CTGTTCGAGA ACCGCTGGGC GCCGCTGTGG
GTGGTGGACT TTCCCATGTT CGAGCATGAC GAGGAAGAAG ACCGCTGGGT GGCCGTGCAC
CACCCCTTCA CGTCGCCGAA GGACGGCCAT GAGAACCTCA TGGACACCGA TCCCGGCAAG
TGCATTGCCA AGGCCTACGA CATGGTGCTG AACGGCTGGG AACTGGGCGG CGGCTCGGTG
CGTATCCACC GCGCTGATGT GCAGGCCAAG GTGTTTGCGG CGCTCAATAT CGGCCCGGAA
GACCAGCGCG CGAAGTTCGG CTACCTGCTG GACGCGTTGC AGTACGGCGC GCCTCCACAC
GGCGGCCTGG CCTTCGGCCT GGACCGCCTG ATCACGCTGA TGACGGGAGC CGAGTCCATC
CGCGACGTGA TCGCCTTCCC CAAGACCCAG CGCGCCCAGG ATCTGCTGAC CCAGGCCCCT
TCGCCTGTGG ACGAAAAGCA GCTGCGCGAA CTGCACATCC GCCTGCGCAA CCCGCTGCCT
GCAGCCCACT GA
|
|---|
| Protein sequence | MAMRSHYCGL VTEALLGQTV TLSGWVNRRR DHGGVIFIDL RDREGYVQVV CDPDRPEMFK
VAEDVRNEFC VQVKGLVRAR PEGTTNDSLK SGKIEVLCQE LNVLNPSVTP PFQMDDDNLS
ETTRLTHRVM DLRRPYMQRN MMLRYKTAIQ VRNFLDKEGF IDIETPMLGK STPEGARDYL
VPSRVHDGQF FALPQSPQLY KQMLMVAGYD RYYQITKCFR DEDLRADRQP EFTQIDCETS
FLNEEEIRAI FQRMIKEVFQ QQLGVDLGEF PTMTYQEAAH RFGSDKPDLR VKLEFTELTD
VMKDVDFKVF SGAANMKGGR VVALRVPGGA REEGGLSRGE IDGYTEFVKI YGAKGLAYIK
VNDKAKGRDG LQSPIVKNIH DAALAEVLQR TGAQDGDLLF FGADKEKIVN DAIGALRLKV
GHSEFGKKNG LFENRWAPLW VVDFPMFEHD EEEDRWVAVH HPFTSPKDGH ENLMDTDPGK
CIAKAYDMVL NGWELGGGSV RIHRADVQAK VFAALNIGPE DQRAKFGYLL DALQYGAPPH
GGLAFGLDRL ITLMTGAESI RDVIAFPKTQ RAQDLLTQAP SPVDEKQLRE LHIRLRNPLP
AAH
|
|---|
| |