Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_0786 |
Symbol | |
ID | 7383726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 813999 |
End bp | 816521 |
Gene Length | 2523 bp |
Protein Length | 840 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643654098 |
Product | MscS Mechanosensitive ion channel |
Protein accession | YP_002552265 |
Protein GI | 222110001 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3264] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATCGCC TTTCCCGCAC CGGCGCGCGC CCGCTGCGCC GCCGTCTCCC CCCGCAGAGC GCACGCCACC TTTGGCAGTG GTTGGTACTG GCCTGCTGCC TGTGGCTGGG CGGCACGCCC GCCCTTGCCC AGACCCGGCC CGCTGCGGCC CCCGCCTCCG CCGCGGCCAG CGCGGTGGAC ACGCTGGGTG AGGACAACGC CCCCCTGCCC TCGGTGGACG AACTGCGCAA GCAGCTCGAC GCCATTCCCG CAAAGCTCGG CGAGGAGGAC GACGGCCGCA AGCTGCTGAC CGAGGTGGCC GCCATCGGCA CGGCGGCCGA GCGCGTGGTG GCCCAGCGCA CCAGCGACCT GGCGGACCTG GACCGCCGCC TGGAAGGCCT GGGCCCCACG CCCGAAAAAG GCGCACCCGC GGATGCGCCC GACGTGGCCG AGCAGCGCAC CGCGCTGAAC AAGCAGCGCG GCGTGATCGA TGCGGAACTC AAGCTCGCCC GCCTGGTGGC AGTGGATGCC GAGCAGCGCA GCGCGGAGAT CGGGCGCCAG CGGCGCGCGC TGTTCCAGGC GGCCCTCACA ACGCGCGTCG ATTCGCCACT GGCCCCCGCC TTCTGGCGCA GCCTGCGCTA CGCTGCGCCC GGCGACAGTG CGCGGCTGCA GGCGCTGGGC GCCAACCTGC GCCGCGCCGT GCAGGCCACG CTGGACTCGC CGCGCCGCGG CACCTTCCTG GGTTACCTGG CCCTGGCCGT CGCCCTGGCC GTGGGGGGCA CCTGGCTGGC GGAGCGTGTG CTGGTGCGCG CGCTGCCCGC GCGGCTGCCG GCCACCCGGC TGCGGCGCAC GCTGCTGGCG GCGGCGGCGG TGGTGGCAAA CGTGCTGATC GTCAGCGCTG CGCTGCAACT CGCGTGGAGC GGGGTCAAGC TCGGCGGCGT GCTGGACGAG GACGTGCGCG CCGTGCAGCA GGCCAGCCTG CGTGCCGCGG CCTACGCCAC CTTCGTCATC ACGCTGGGGC ACGCACTGCT ATCGCGCCGG CGCAGTTCCT GGCGGCTGCT GCCCATCTCC GACGCGCTCG CCCGCCGGCT CAGCCCCTTC CCGTGGTGGA TCGCGGCACT GTCGGCGCTG GGCGGGCTGG TCACACAGGT CAACGCCATC GTGGGCGCCA GCCTGGCGGC CGAAGTGCTG GTGCACGCCG TGTCCGCGGT GTTGCTGTCG GTGACGGTGG CCGTCGCGCT GGGCCGGCTG CGGGCAACGC CCCAGGCAGC GGACGCGGCC GATGGCGCCA CCGACGCGGC ACCCGCGGAG AAGGCGGGCC GCCCCCTCTG GGTGGGGTTG ATCCTGGCCA GCGCGGGCCT TGCCGCGGCC GCGGCCGCGC TGGCCGTGGT GCTGGGCTTC GTGGCGCTGG GCGGCACGCT GGCGCGGCAG ATGGTGTGGT CGGGCGTGGT GTTTGCCACC ACCTATCTGC TGATGCAGTT GGTGGACGAC CTGTGCGACG CGTTGCTCTC CTCCCACGGC GGCCTGGGCG CGCGCATCCA CGCCGCGTTG GCCATCGACG CCCAGTTGCT GGACCAGGCC GCGGTGCTGC TGGCCGGCGT GCTGCGTGTG GCGCTGTTCT TCTACATGGC GATCGCGCTG ATGGCGCCGC TGGGCACCAA CCCGGACGAG CTGTTCCGCC GCGGCAGCAA GCTGGACCAC AACCTGCAGA TCGGCGACTT CACGCTGGCG CCCCAGGCAC TGCTCACGGC GCTGGCGGTG ATCTGTGCGG GCTTCCTGGC GATACGCATC GTCAAGCGCT GGCTCAGCGA CCGCTATTTC CCCCACACAT CGCTGGAGCC GGGCATGCGC AGCTCCATCG TCACGCTGCT GGGCTACGTG GGCGGCGTGG TAGTGATCGC CGTGGCGCTG GCGGGCCTGG GGATCAGCGT GGAGCGCATC GCCTGGGTGG CGAGCGCGCT GTCGGTGGGC ATCGGCTTCG GCCTGCAGGC CATCGTGCAG AACTTCATCT CGGGCCTGAT CCTGCTGGCC GAGCGGCCGG TGAAGGTGGG CGACTGGGTG GTGCTGGGCG ACACCGAGGG CGACGTGCGC CGCGTGAACG TGCGCGCCAC CGAGATCCAG CTGGGCGACC GCTCCACGGT GATCGTGCCC AACTCGGAAT TCATCACCAA GACCGTGCGC AACATGACGC TGGGCAGCGC CCAGGGCCGG GTGCTGCTGC GCCTGCCCGC ACCGCTGGAC ACCGACGCGC GGCGCATGCG CGAGCTGATC CTGCAGGCCT TTCATGCGCA CGAGGACATC CTGGAGAGCC CCGCGCCATC GGTGACGCTG GAAGGCATCC AGAGCGGCAC GCTCACCTTC CTGGCGATCG GCTACGTGAG CAGCCCGCGC AACGCGGGAG GCGTGCGCAG CGACGTGCTG TTCGCCATTT TGGAGGCGCT GCGCGATGCG GGCCTGTCGC TGTCGCCTCC AGCCACCACC TCGGTGGCGC AGGCGCCGCG CGACGCCGCC CAGGAAGCGC CGCCGCTGTC GGAGCGCGTC TGA
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Protein sequence | MHRLSRTGAR PLRRRLPPQS ARHLWQWLVL ACCLWLGGTP ALAQTRPAAA PASAAASAVD TLGEDNAPLP SVDELRKQLD AIPAKLGEED DGRKLLTEVA AIGTAAERVV AQRTSDLADL DRRLEGLGPT PEKGAPADAP DVAEQRTALN KQRGVIDAEL KLARLVAVDA EQRSAEIGRQ RRALFQAALT TRVDSPLAPA FWRSLRYAAP GDSARLQALG ANLRRAVQAT LDSPRRGTFL GYLALAVALA VGGTWLAERV LVRALPARLP ATRLRRTLLA AAAVVANVLI VSAALQLAWS GVKLGGVLDE DVRAVQQASL RAAAYATFVI TLGHALLSRR RSSWRLLPIS DALARRLSPF PWWIAALSAL GGLVTQVNAI VGASLAAEVL VHAVSAVLLS VTVAVALGRL RATPQAADAA DGATDAAPAE KAGRPLWVGL ILASAGLAAA AAALAVVLGF VALGGTLARQ MVWSGVVFAT TYLLMQLVDD LCDALLSSHG GLGARIHAAL AIDAQLLDQA AVLLAGVLRV ALFFYMAIAL MAPLGTNPDE LFRRGSKLDH NLQIGDFTLA PQALLTALAV ICAGFLAIRI VKRWLSDRYF PHTSLEPGMR SSIVTLLGYV GGVVVIAVAL AGLGISVERI AWVASALSVG IGFGLQAIVQ NFISGLILLA ERPVKVGDWV VLGDTEGDVR RVNVRATEIQ LGDRSTVIVP NSEFITKTVR NMTLGSAQGR VLLRLPAPLD TDARRMRELI LQAFHAHEDI LESPAPSVTL EGIQSGTLTF LAIGYVSSPR NAGGVRSDVL FAILEALRDA GLSLSPPATT SVAQAPRDAA QEAPPLSERV
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