Gene Dtpsy_0786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_0786 
Symbol 
ID7383726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp813999 
End bp816521 
Gene Length2523 bp 
Protein Length840 aa 
Translation table11 
GC content73% 
IMG OID643654098 
ProductMscS Mechanosensitive ion channel 
Protein accessionYP_002552265 
Protein GI222110001 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3264] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCGCC TTTCCCGCAC CGGCGCGCGC CCGCTGCGCC GCCGTCTCCC CCCGCAGAGC 
GCACGCCACC TTTGGCAGTG GTTGGTACTG GCCTGCTGCC TGTGGCTGGG CGGCACGCCC
GCCCTTGCCC AGACCCGGCC CGCTGCGGCC CCCGCCTCCG CCGCGGCCAG CGCGGTGGAC
ACGCTGGGTG AGGACAACGC CCCCCTGCCC TCGGTGGACG AACTGCGCAA GCAGCTCGAC
GCCATTCCCG CAAAGCTCGG CGAGGAGGAC GACGGCCGCA AGCTGCTGAC CGAGGTGGCC
GCCATCGGCA CGGCGGCCGA GCGCGTGGTG GCCCAGCGCA CCAGCGACCT GGCGGACCTG
GACCGCCGCC TGGAAGGCCT GGGCCCCACG CCCGAAAAAG GCGCACCCGC GGATGCGCCC
GACGTGGCCG AGCAGCGCAC CGCGCTGAAC AAGCAGCGCG GCGTGATCGA TGCGGAACTC
AAGCTCGCCC GCCTGGTGGC AGTGGATGCC GAGCAGCGCA GCGCGGAGAT CGGGCGCCAG
CGGCGCGCGC TGTTCCAGGC GGCCCTCACA ACGCGCGTCG ATTCGCCACT GGCCCCCGCC
TTCTGGCGCA GCCTGCGCTA CGCTGCGCCC GGCGACAGTG CGCGGCTGCA GGCGCTGGGC
GCCAACCTGC GCCGCGCCGT GCAGGCCACG CTGGACTCGC CGCGCCGCGG CACCTTCCTG
GGTTACCTGG CCCTGGCCGT CGCCCTGGCC GTGGGGGGCA CCTGGCTGGC GGAGCGTGTG
CTGGTGCGCG CGCTGCCCGC GCGGCTGCCG GCCACCCGGC TGCGGCGCAC GCTGCTGGCG
GCGGCGGCGG TGGTGGCAAA CGTGCTGATC GTCAGCGCTG CGCTGCAACT CGCGTGGAGC
GGGGTCAAGC TCGGCGGCGT GCTGGACGAG GACGTGCGCG CCGTGCAGCA GGCCAGCCTG
CGTGCCGCGG CCTACGCCAC CTTCGTCATC ACGCTGGGGC ACGCACTGCT ATCGCGCCGG
CGCAGTTCCT GGCGGCTGCT GCCCATCTCC GACGCGCTCG CCCGCCGGCT CAGCCCCTTC
CCGTGGTGGA TCGCGGCACT GTCGGCGCTG GGCGGGCTGG TCACACAGGT CAACGCCATC
GTGGGCGCCA GCCTGGCGGC CGAAGTGCTG GTGCACGCCG TGTCCGCGGT GTTGCTGTCG
GTGACGGTGG CCGTCGCGCT GGGCCGGCTG CGGGCAACGC CCCAGGCAGC GGACGCGGCC
GATGGCGCCA CCGACGCGGC ACCCGCGGAG AAGGCGGGCC GCCCCCTCTG GGTGGGGTTG
ATCCTGGCCA GCGCGGGCCT TGCCGCGGCC GCGGCCGCGC TGGCCGTGGT GCTGGGCTTC
GTGGCGCTGG GCGGCACGCT GGCGCGGCAG ATGGTGTGGT CGGGCGTGGT GTTTGCCACC
ACCTATCTGC TGATGCAGTT GGTGGACGAC CTGTGCGACG CGTTGCTCTC CTCCCACGGC
GGCCTGGGCG CGCGCATCCA CGCCGCGTTG GCCATCGACG CCCAGTTGCT GGACCAGGCC
GCGGTGCTGC TGGCCGGCGT GCTGCGTGTG GCGCTGTTCT TCTACATGGC GATCGCGCTG
ATGGCGCCGC TGGGCACCAA CCCGGACGAG CTGTTCCGCC GCGGCAGCAA GCTGGACCAC
AACCTGCAGA TCGGCGACTT CACGCTGGCG CCCCAGGCAC TGCTCACGGC GCTGGCGGTG
ATCTGTGCGG GCTTCCTGGC GATACGCATC GTCAAGCGCT GGCTCAGCGA CCGCTATTTC
CCCCACACAT CGCTGGAGCC GGGCATGCGC AGCTCCATCG TCACGCTGCT GGGCTACGTG
GGCGGCGTGG TAGTGATCGC CGTGGCGCTG GCGGGCCTGG GGATCAGCGT GGAGCGCATC
GCCTGGGTGG CGAGCGCGCT GTCGGTGGGC ATCGGCTTCG GCCTGCAGGC CATCGTGCAG
AACTTCATCT CGGGCCTGAT CCTGCTGGCC GAGCGGCCGG TGAAGGTGGG CGACTGGGTG
GTGCTGGGCG ACACCGAGGG CGACGTGCGC CGCGTGAACG TGCGCGCCAC CGAGATCCAG
CTGGGCGACC GCTCCACGGT GATCGTGCCC AACTCGGAAT TCATCACCAA GACCGTGCGC
AACATGACGC TGGGCAGCGC CCAGGGCCGG GTGCTGCTGC GCCTGCCCGC ACCGCTGGAC
ACCGACGCGC GGCGCATGCG CGAGCTGATC CTGCAGGCCT TTCATGCGCA CGAGGACATC
CTGGAGAGCC CCGCGCCATC GGTGACGCTG GAAGGCATCC AGAGCGGCAC GCTCACCTTC
CTGGCGATCG GCTACGTGAG CAGCCCGCGC AACGCGGGAG GCGTGCGCAG CGACGTGCTG
TTCGCCATTT TGGAGGCGCT GCGCGATGCG GGCCTGTCGC TGTCGCCTCC AGCCACCACC
TCGGTGGCGC AGGCGCCGCG CGACGCCGCC CAGGAAGCGC CGCCGCTGTC GGAGCGCGTC
TGA
 
Protein sequence
MHRLSRTGAR PLRRRLPPQS ARHLWQWLVL ACCLWLGGTP ALAQTRPAAA PASAAASAVD 
TLGEDNAPLP SVDELRKQLD AIPAKLGEED DGRKLLTEVA AIGTAAERVV AQRTSDLADL
DRRLEGLGPT PEKGAPADAP DVAEQRTALN KQRGVIDAEL KLARLVAVDA EQRSAEIGRQ
RRALFQAALT TRVDSPLAPA FWRSLRYAAP GDSARLQALG ANLRRAVQAT LDSPRRGTFL
GYLALAVALA VGGTWLAERV LVRALPARLP ATRLRRTLLA AAAVVANVLI VSAALQLAWS
GVKLGGVLDE DVRAVQQASL RAAAYATFVI TLGHALLSRR RSSWRLLPIS DALARRLSPF
PWWIAALSAL GGLVTQVNAI VGASLAAEVL VHAVSAVLLS VTVAVALGRL RATPQAADAA
DGATDAAPAE KAGRPLWVGL ILASAGLAAA AAALAVVLGF VALGGTLARQ MVWSGVVFAT
TYLLMQLVDD LCDALLSSHG GLGARIHAAL AIDAQLLDQA AVLLAGVLRV ALFFYMAIAL
MAPLGTNPDE LFRRGSKLDH NLQIGDFTLA PQALLTALAV ICAGFLAIRI VKRWLSDRYF
PHTSLEPGMR SSIVTLLGYV GGVVVIAVAL AGLGISVERI AWVASALSVG IGFGLQAIVQ
NFISGLILLA ERPVKVGDWV VLGDTEGDVR RVNVRATEIQ LGDRSTVIVP NSEFITKTVR
NMTLGSAQGR VLLRLPAPLD TDARRMRELI LQAFHAHEDI LESPAPSVTL EGIQSGTLTF
LAIGYVSSPR NAGGVRSDVL FAILEALRDA GLSLSPPATT SVAQAPRDAA QEAPPLSERV