| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0776 |
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| Symbol | |
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| ID | 7383716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 804614 |
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| End bp | 805270 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643654088 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_002552255 |
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| Protein GI | 222109991 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACG AACGGCAGGG CCGGCTGTCG CGCCGCACCT GCCTGGCTTC GCTGGCGGCG
GGGCCGGCTG CATGGCTGGG CGTGGCTGCA CCTGCGCATG CGGGGAGCCA GCTGGAGGAG
CCGTTGATCG ATTCCGTGCG CACCGCGCTC AGCTCCGCCG TGGCAGACCT GGCACCGCCC
GAGCCGCTAT TTGCCTCCAC CGAGGCACGC CTGCTGTATC TGCGCTGGCT TGGCACCATG
AGCGACCGCC TGCGCCGACG CAAGCCCGAA TGGGAAGTGC GCCGCGACTT CCTGCAGACG
GTGTGGTACG AGTCCAAGCG CTCGGGGCTG GATGTGTCGC TGGTCATGGG CCTGATCCAG
GTGGAGAGCG CATTCCGCAA GTTCGCCGTC TCTCCGGTGG GTGCGCGCGG CTATATGCAG
GTGATGCCAT TCTGGACCCG CGTGATCGGT GACGGCGACC CGGGCAAGCT GTTCCACATG
CAGACCAACC TGCGCTTTGG CTGCGTGATC CTGCGCCACT ACCTCGACCG CGAGCGGGGC
GACCTGTACA TGGCGCTGGG CCGCTACAAC GGCAGCCGGG GCAAGGCGCC GTATCCGAGC
GCCGTGTTCG CAGCGCAGCG CAACTGGTTC TTCCAGGAGC GTACTTCGGA CGCCTGA
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| Protein sequence | MTDERQGRLS RRTCLASLAA GPAAWLGVAA PAHAGSQLEE PLIDSVRTAL SSAVADLAPP
EPLFASTEAR LLYLRWLGTM SDRLRRRKPE WEVRRDFLQT VWYESKRSGL DVSLVMGLIQ
VESAFRKFAV SPVGARGYMQ VMPFWTRVIG DGDPGKLFHM QTNLRFGCVI LRHYLDRERG
DLYMALGRYN GSRGKAPYPS AVFAAQRNWF FQERTSDA
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