Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_0767 |
Symbol | |
ID | 7383706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 794538 |
End bp | 795755 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643654078 |
Product | type II secretion system protein |
Protein accession | YP_002552246 |
Protein GI | 222109982 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1459] Type II secretory pathway, component PulF |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGACCG TTGCATCGAG GGGCATCAAG GACTTTGTCT TCGAGTGGGA GGGCAAGGAT CGTAGCGGCA AGATCGTGCG CGGCGAAGTA CGCGCTGCGG GAGAGAACCA GGTCAAGGCG ACGCTGCGGC GGCAGGGCGT TCTGCCAACC AAGATCAAGA AGCGCCGGAT GAGCGCGGGC AAAAAGATCA AGCCCAAAGA CATCGCGCTG TTCACGCGCC AGATGGCCAC GATGATGAAG GCCGGTGTTC CACTGCTTCA GGCATTTGAT ATCGTGGGCC GGGGTAATAC CAATCCCAGT GTGACCAAGC TGCTCAACGA TATCCGCGGA GATGTGGAGA CAGGAACGTC CCTGAATGCC GCATTCCGTA AATATCCGAT GTACTTCGAC AGCCTTTACT GCAACCTCGT AGAGGCCGGC GAAGCCGCCG GTATTCTGGA AGCGTTGCTC GACCGGCTGG CCCTGTACAT GGAGAAGACC GAGGCCATCA AATCCAAGAT CCGGTCGGCG CTGATGTATC CGATCTCGGT GATCATCGTT GCGTTTGTCG TGGTGACGAT CATCATGATT TTCGTGATTC CCGCGTTCAA AGAGGTTTTC ACTTCCTTCG GCGCCGACCT GCCCGCTCCT ACCCTGTTCG TGATGGCCAT CAGCGAGTTC TTCGTGGCTT ACTGGTGGCT GATATTCGGC GTCATCGGCG GGGGGTTCTA CTTCTTCATG CAGGCCTGGA AGCGCAGCGA AAAAATGCAG CGTTTCATGG ACCGTTTCCT GTTGAAAATG CCCATCTTCG GTGCATTGAT CGACAAGTCC TGCGTTGCCC GTTGGACCCG CACCCTGTCG ACCATGTTCG CTGCCGGTGT GCCATTGGTG GAGGCACTGG ACTCGGTGGC CGGTGCATCG GGCAACTCGG TCTACGCCAT CGCGACGGAG AAGATTCAGC AGGAAGTCTC CACAGGTACC AGCCTGACGG CCGCCATGGG GAATGCCAAC GTATTCCCCT CCATGGTGCT GCAGATGTGT GCGATCGGCG AGGAATCCGG CTCCATCGAC CACATGCTGG GTAAGGCCGC CGACTTCTAT GAAGCCGAAG TGGATGAAAT GGTGGCCGGC CTGTCCAGCC TGATGGAGCC CATCATCATC GTGTTCCTGG GCACGCTGAT CGGTGGCATC GTGGTGTCGA TGTACCTTCC GATCTTCAAG CTCGGGCAAG TGGTTTGA
|
Protein sequence | MATVASRGIK DFVFEWEGKD RSGKIVRGEV RAAGENQVKA TLRRQGVLPT KIKKRRMSAG KKIKPKDIAL FTRQMATMMK AGVPLLQAFD IVGRGNTNPS VTKLLNDIRG DVETGTSLNA AFRKYPMYFD SLYCNLVEAG EAAGILEALL DRLALYMEKT EAIKSKIRSA LMYPISVIIV AFVVVTIIMI FVIPAFKEVF TSFGADLPAP TLFVMAISEF FVAYWWLIFG VIGGGFYFFM QAWKRSEKMQ RFMDRFLLKM PIFGALIDKS CVARWTRTLS TMFAAGVPLV EALDSVAGAS GNSVYAIATE KIQQEVSTGT SLTAAMGNAN VFPSMVLQMC AIGEESGSID HMLGKAADFY EAEVDEMVAG LSSLMEPIII VFLGTLIGGI VVSMYLPIFK LGQVV
|
| |