| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0732 |
|---|
| Symbol | |
|---|
| ID | 7383670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 761914 |
|---|
| End bp | 762657 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643654042 |
|---|
| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
|---|
| Protein accession | YP_002552211 |
|---|
| Protein GI | 222109947 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
|---|
| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.404804 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTCA TCCCCGCCAT CGACCTCAAG GACGGCCACT GCGTACGCCT CAAGCAAGGT
GACATGGACC AATCGACCAC CTTTGGCGAA GACCCCGCCG CCATGGCCCG CAAGTGGGCG
GATGCGGGCG CGCGCCGCCT GCACCTGGTG GACCTGAACG GCGCGTTTGC CGGCCAGCCC
AAGAACAAGG CGGCCATCAA GGCCATCCTG GCCGAGGTGG GCGCCGACAT TCCGGTGCAG
TTGGGCGGCG GCATCCGCGA CTTGGACACC ATCGAGCGCT ACATCGACGC CGGGCTGCGG
TACGTCATCA TCGGCACGGC CGCGGTGAAG AACCCCGGCT TCCTCAAGGA TGCGTGCAGC
GCGTTTGGCG GCCACATCAT CGTGGGCCTG GACGCCAAGG ACGGCAAGGT GGCCACCGAC
GGCTGGAGCA AGCTCACCGG CCACGAGGTG GTTGATCTGG CGCGCAAGTT CCAGGACTGG
GGCGTGGAAT CCATCATCTA CACCGACATC GGCCGCGACG GCATGCTCTC GGGCATCAAT
ATCGAGGCTA CGGTGAAGCT GGCCCAGGCC CTCACCATCC CAGTGATCGC CTCGGGCGGC
CTGGCCGGCA TCGCGGACAT CGAGAAGCTC TGCGAAGTCG AAAACGAAGG CGTGGAAGGC
GTCATCTGCG GGCGCGCGAT CTATTCCGGC GACCTGGATT TCGCAGCCGC GCAGCATCGC
GCCGACGAGC TGAGCCTGGC CTGA
|
|---|
| Protein sequence | MLLIPAIDLK DGHCVRLKQG DMDQSTTFGE DPAAMARKWA DAGARRLHLV DLNGAFAGQP
KNKAAIKAIL AEVGADIPVQ LGGGIRDLDT IERYIDAGLR YVIIGTAAVK NPGFLKDACS
AFGGHIIVGL DAKDGKVATD GWSKLTGHEV VDLARKFQDW GVESIIYTDI GRDGMLSGIN
IEATVKLAQA LTIPVIASGG LAGIADIEKL CEVENEGVEG VICGRAIYSG DLDFAAAQHR
ADELSLA
|
|---|
| |