Gene Dtpsy_0723 details

Gene Information

• Locus tag: Dtpsy_0723
• ID: 7384228
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 753816
• End bp: 754571
• Gene Length: 756 bp
• Protein Length: 251 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 643654033
• Product: ABC-2 type transporter
• Protein accession: YP_002552202
• Protein GI: 222109938
• COG category: [S] Function unknown
• COG ID: [COG1511] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGGCT GGCAGACCCT GTTCTACAAG GAAGTGCTGC GCTTTTGGAA GGTGGGCTTC 
CAGACCGTGG CGGCGCCGGT GCTCACGGCG GTGCTGTACC TGCTGATCTT CGGCCATGTG 
CTCGAAGACC ATGTCAAGGT CTATGACCGG CTGAGCTACA CCGCCTTCCT GGTGCCCGGC 
CTGGTGATGA TGAGCGTGCT GCAGAACGCC TTTGCCAACA GCTCGTCCAG CCTGATCCAG 
AGCAAGATCA TGGGCAGTCT GGTGTTCGTG CTGCTCACGC CGCTGTCGCA CCGTGCCTGG 
TTCGCGGCCT ACGTGGGCTC GTCCATGGTG CGCGGCCTGG TGGTGGGCCT GGGTGTGTTC 
ATCGTCACGC TGGCGTTCGC CACGCCGCAG TTCGCCGCGC CGCTGTGGAT TCTTGCGTTC 
GCGCTGCTGG GCGCGGCGCT GCTGGCCACG CTCGGGGTCA TCGCGGGACT GTGGGCCGAC 
AAGTTCGACC AGATGGCGGC ATTCCAGAAC TTCATCATCG TGCCCATGAC CTTCCTGTCG 
GGCGTGTTCT ATTCGGTGCA ATCGCTGCCG CCGTTCTGGC AGGGCGCAAG CCACCTGAAC 
CCGTTCTTCT ACATGATCGA CGGCTTCCGC TACGGCTTCT TCGGCGTGAG CGACGTCTCC 
CCCTGGCTCA GCCTGGGCGT CGTCGGCCTG GCATGGGCGC TGGTCAGCCT GCTGGCGCTG 
CACCTGCTGC GCACGGGCTA CAAAATCAGG AACTGA 

 

Protein sequence

MIGWQTLFYK EVLRFWKVGF QTVAAPVLTA VLYLLIFGHV LEDHVKVYDR LSYTAFLVPG 
LVMMSVLQNA FANSSSSLIQ SKIMGSLVFV LLTPLSHRAW FAAYVGSSMV RGLVVGLGVF 
IVTLAFATPQ FAAPLWILAF ALLGAALLAT LGVIAGLWAD KFDQMAAFQN FIIVPMTFLS 
GVFYSVQSLP PFWQGASHLN PFFYMIDGFR YGFFGVSDVS PWLSLGVVGL AWALVSLLAL 
HLLRTGYKIR N