Gene Dtpsy_0701 details

Gene Information

• Locus tag: Dtpsy_0701
• ID: 7384206
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 729554
• End bp: 730228
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 643654011
• Product: Pilus assembly protein PilO
• Protein accession: YP_002552180
• Protein GI: 222109916
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3167] Tfp pilus assembly protein PilO

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAAA AGAATAAGCC AAAACTTGAT TTCGCAAAGC TGCAGGGGGA TCTGCAACGG 
CAGTTTCACA ACTTAGATCC TAAAGATCCT TCTTTGTGGC CAGTGTTGCC CCGTGCATTG 
CTTTGTGCAC TCATCGCTGC GGGCGTCGCT ACCTTTCTTT GGTTCTTTAA GTTGACTGAG 
TATGAGCAAG AACTGACGGC CGAGCGGAAT ACTGAGCAGA CGCTTCGGGA GGATTACCAG 
AAAAAACTGG TTAAGGCGGT CAGTCTGGAG GCGTTAAAAA AACAACGAGA ACAGATTCAG 
CAGTATGTGA TTCAATTGGA AAAGCAACTG CCTAGCAAGG CGGAAATGTC TGCTCTGCTC 
TCTGATATCA ACCAGGCGGG GCTTGGGCGG AGTCTGCAAT TTGAATTGTT TAGGCCCGGG 
CAAATAGTGA TCAAGGACTA TTACGCTGAG CTGCCTATTG CTATTCGCGT GGCAGGGAAG 
TACCACGACA TGGGTGCTTT TGCCTCAGAT GTGGCCAACT TATCCCGCAT TGTTACTTTG 
AACAATCTGG CAATTACTCC TATTTCAAAG GATGCAGCCG GCAATTTGAC GCTTGAGGCG 
ACAGCAAGAA CGTTCCGTTA TCTGGATCCT GAGGAAATAC AGGCGCAGAA GGCGGCTAAG 
GGGGGTAAGA AATGA 

 

Protein sequence

MAKKNKPKLD FAKLQGDLQR QFHNLDPKDP SLWPVLPRAL LCALIAAGVA TFLWFFKLTE 
YEQELTAERN TEQTLREDYQ KKLVKAVSLE ALKKQREQIQ QYVIQLEKQL PSKAEMSALL 
SDINQAGLGR SLQFELFRPG QIVIKDYYAE LPIAIRVAGK YHDMGAFASD VANLSRIVTL 
NNLAITPISK DAAGNLTLEA TARTFRYLDP EEIQAQKAAK GGKK