Gene Dtpsy_0700 details

Gene Information

• Locus tag: Dtpsy_0700
• ID: 7384205
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 728941
• End bp: 729552
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 643654010
• Product: Fimbrial assembly family protein
• Protein accession: YP_002552179
• Protein GI: 222109915
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3166] Tfp pilus assembly protein PilN

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATTCTTA TCAACCTACT CCCGCATCGG GAGGCTGCTC GTAAACGCAG GCGGGAGGCG 
TTTCAAGCCG TCATGCTCGC TTCTGCATTG GTGGGGCTTG CCATTGCTGC GGCTATTTAT 
TGGTGGTTTC AGATGATGAT CACTGACCAG CAAGATCGCA ATAATTTTCT ACGAAGCGAA 
ATCGGAGTCC TTGAGGGACA AATCAAGGAA ATCGCGACTA TTGAAGAAGA AATTGCAGCT 
CTACAAGCGC GACAGAAAGC AGTAGAGGAC TTGCAATCTG ATCGAAATTT GCCTGTGCAC 
CTCCTTAATG AATTGGTAGC GCAATTACCT GATGGTGTAT ATATCACCAG TTTGAAGCAA 
ATAGATCAAA CTGTAACTAT GCAGGGTATG GCTCAGTCTA ATGAGCGCGT TTCTGAAATG 
CTGCGCAATC TTGCCAACAA TACCCCATGG TTTTCGAAGC CGGAATTGGT GGAAATCGTC 
GCAGCAAATG TTGCCTTAAC TCCAAAGGAC CAGCGTCGGG TTGCCTCTTT TAATCTGCGT 
TTCCGGCTGG TGCGAAGCGC CGAAGCGCAG AAGGCAATGG AGGCCGCCAG TGCCGTGGCT 
GCGAGGAAGT AA 

 

Protein sequence

MILINLLPHR EAARKRRREA FQAVMLASAL VGLAIAAAIY WWFQMMITDQ QDRNNFLRSE 
IGVLEGQIKE IATIEEEIAA LQARQKAVED LQSDRNLPVH LLNELVAQLP DGVYITSLKQ 
IDQTVTMQGM AQSNERVSEM LRNLANNTPW FSKPELVEIV AANVALTPKD QRRVASFNLR 
FRLVRSAEAQ KAMEAASAVA ARK