| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0674 |
|---|
| Symbol | |
|---|
| ID | 7384179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 700841 |
|---|
| End bp | 701791 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643653985 |
|---|
| Product | transaldolase B |
|---|
| Protein accession | YP_002552154 |
|---|
| Protein GI | 222109890 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0176] Transaldolase |
|---|
| TIGRFAM ID | [TIGR00874] transaldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.181851 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAAC TCGACGCGCT CAAGCAGTAC ACCACCGTGG TGGCCGACAC CGGCGATTTC
AAGCAGCTGG CCCAGTTCCA GCCGCAAGAC GCCACCACCA ACCCCTCGCT GATCCTGAAG
GCCGTGCAAA AGCCCGAGTA CGCGCCGCTG CTCAAGGACT GCGTGACGCG CTGGCATGGC
CGCGCTATCG ACGAGCTGAT GGACCGCCTG ATCGTGCGTT TCGGCTGCGA GATCCTGTCG
ATCATCCCTG GGCGCGTGTC CACCGAGGTG GATGCACGCC TGTCGTTCGA TACCGCAGCG
ACCGTGGCGC GTGCGGAGCG CATCGTGGAG CTGTACCAGG CCGAAGGGCT GCACATCGAC
CGCGTGCTCA TCAAGATCGC CGCCACGTGG GAGGGCATCC AGGCCGCGCG CCAACTGGAG
CAGCGCGGCA TCCACACCAA CCTTACGCTG CTGTTTTCGT TTGCACAGGC GGTGGCCTGT
GGTCAGGCGA AGGTGCAGCT CATTTCGCCT TTCGTCGGAC GCATTTACGA CTGGTACAAG
AAGCAGGCCG GCGCAAACTG GGACGAGGCC GCCATGGCCG GCGCCAATGA CCCGGGCGTG
CAGTCCGTGC GCGCCATCTA CAACCATTAC AAGCATTTCG GCATCGGCAC CGAGGTCATG
GGTGCGAGTT TTCGCAACAC CGGGCAGATC GTCGCGCTGG CGGGCTGCGA CCTGCTGACC
ATTGCCCCCG AACTGCTGGC CCAGTTGGCC GCCAGCGATG CGCCGGTGGC ACGCGTGCTC
GACCCCGAGG CGGCACGCCG CGTTGCGCTG CAACCCGTGC AGTACGACGA GGCGGGCTTT
CGCTATGCGC TCAATGCCGA CGCCATGGCC ACCGAGAAGC TGGCCGAAGG CATCCGCGCA
TTTGCGGCGG ACGCGGCCAA GCTGGAACAA CTGATGCAAG CCGCTGCATG A
|
|---|
| Protein sequence | MNQLDALKQY TTVVADTGDF KQLAQFQPQD ATTNPSLILK AVQKPEYAPL LKDCVTRWHG
RAIDELMDRL IVRFGCEILS IIPGRVSTEV DARLSFDTAA TVARAERIVE LYQAEGLHID
RVLIKIAATW EGIQAARQLE QRGIHTNLTL LFSFAQAVAC GQAKVQLISP FVGRIYDWYK
KQAGANWDEA AMAGANDPGV QSVRAIYNHY KHFGIGTEVM GASFRNTGQI VALAGCDLLT
IAPELLAQLA ASDAPVARVL DPEAARRVAL QPVQYDEAGF RYALNADAMA TEKLAEGIRA
FAADAAKLEQ LMQAAA
|
|---|
| |