| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0667 |
|---|
| Symbol | |
|---|
| ID | 7384172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 692304 |
|---|
| End bp | 693215 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643653978 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002552147 |
|---|
| Protein GI | 222109883 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAA CGCTCTTGCG CTGGTACGAC AGCGACGTGG CCCACAGCTT TCGCACCTCG
CCCGTGGCCA TCATCGCGGC GCTGATTGCC GCCGTGTGCG TGTTCTGCTC CATCTTTGCC
GGCTGGGTGG CGCCACACAA CCCGTTCGAC CTGAGCACGC TGGAGCTGTC GGACGCGCGC
CTGCCGCCCG TGTGGCAGGC CGAAGGCACC TGGAAGTACG CCCTGGGCAC CGATGACCAG
GGCCGCGACA TCCTCTCGGC GCTGATCTAC GGCGCGCGCA TCTCGCTGGT GGTGGGCCTG
GCCTCCGTGG CGCTGTCGGT CGTCGTGGGC GTGGCGCTGG GGTTGGTGGC GGGCTTTCGC
GGCGGATGGG TGGACGGCGT GCTCATGCGC CTGTGCGACG TGATGCTGTC GTTCCCCGCC
ATCCTGATCG CGCTGCTGAT TGCCGGCGTG GGGCGTGCGG TGTTCCCCAA CGCGCCCGAT
TCGCTGGCCT TCGGCGTGCT GATCCTGTCG ATCTCGCTCA CGGGATGGGT GCAGTACGCG
CGCACCGTGC GCGGCTCCAC GCTGGTGGAG CGCAACAAGG AATACGTGCA GGCCGCGCGC
GTCACCGGCG TGTCGCCGCT GCGCATCATG CGCAAGCATG TGCTGCCCAA CGTGCTGGGG
CCGGTCATGG TGCTGGCCAC CATCCAGGTG GCCACGGCCA TCATTACCGA AGCCACGCTG
TCCTTCCTGG GAGTGGGCGC GCCGCCCACG TCGCCCTCGC TGGGCACGCT GATCCGCATC
GGCAACGACT ACCTGTTCTC CGGCGAGTGG TGGATCACTG TCTTCCCCGG CGTGATGCTG
GTGCTGATCG CGCTGTCCGT GAACCTGCTG GGCGACTGGC TGCGCGATGC ACTCAACCCG
CGCCTGCGCT GA
|
|---|
| Protein sequence | MKQTLLRWYD SDVAHSFRTS PVAIIAALIA AVCVFCSIFA GWVAPHNPFD LSTLELSDAR
LPPVWQAEGT WKYALGTDDQ GRDILSALIY GARISLVVGL ASVALSVVVG VALGLVAGFR
GGWVDGVLMR LCDVMLSFPA ILIALLIAGV GRAVFPNAPD SLAFGVLILS ISLTGWVQYA
RTVRGSTLVE RNKEYVQAAR VTGVSPLRIM RKHVLPNVLG PVMVLATIQV ATAIITEATL
SFLGVGAPPT SPSLGTLIRI GNDYLFSGEW WITVFPGVML VLIALSVNLL GDWLRDALNP
RLR
|
|---|
| |