Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_0663 |
Symbol | |
ID | 7384168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 686703 |
End bp | 688283 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643653974 |
Product | extracellular solute-binding protein family 5 |
Protein accession | YP_002552143 |
Protein GI | 222109879 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.373149 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGAATCA ATGCCTTGAT CCTTTCTCTT GCGGCGGCCT GCGCGGCGGC CGTGGTTCCA GCGGCGCATG CCAAGACCTT CAAGTGGGCC AGCCAGGGCG AAATCGCCAC CTGGGATATC CACTCCCAAA ACAACGCGCT GCAAAACGCC ATCCATTCGT ATGTGTACGA AAGCCTGGTC TACTACAACA GCCGTACCTT CGAGGTCGAG CCCATGCTGG CGACGGCGTG GCGAGAGGTC AGCCCCACAC AAGTGCGTTT CACGCTGCGC CAGGGCGTGA AGTTCCACGA TGGTTCCGCC TTCACGGCCG ATGACGCCGT GTACTCGCTG CAGCGCGCCA TGTCCAAGAC ATCGAACTAC ACGCCGTATG TGCAAGGCAT CGACAAGGTG GTGAAGGTGG ATGCGCAGAC CATCGACATC TTCCTCAAGT CGCCCAACCC CGTGCTGCTG CGGCAGATGA CCGAGTTGCG CATGATGAGC AAGGCCTGGG CCGAGAAGAA CCGATCGGTG GAGCCGAAGG ACATCAAGGG CACCGATGAG AACTTCGCCC ATCGCAACGC CATGGGCACG GGCCCCTATA CGCTGGAGAC ATGGCAACCC GACGTGAAGA TGGTCTTCAA GCGCAATCCG AACTGGTGGG GCCAGATGGA AGGCAATGTG ACCGAGATCG TCTACACCCC CATCAAGTCG GCCGCCACGC GCATTGCCGC CCTTCTGTCG GGTGAGGTGG ACCTGGTGCT GGACCCCTCA CCGCAGGATC TGCCCCGCCT GCGCTCGTCG GGCACCATCA AGGTGGTGGA CGGGCTGGAG AACCGTACCA TCTTCCTGGG CATGGACCAG TTCCGGGATG AACTCGTGGG CTCCAACATC AAGGGCAAGA ACCCCTTGAA GGACCTGCGC GTGCGCAAGG CGCTGTACCA GTCCATCGAC GCCAATGCCC TCACGCGCAA CATCCTGCGC GGCCTGGGCA AGCCGACTGG TACCCTGGTG GCGCCGCAGG TCGCAGGCTG GTCGGAGGCC GTGGGCAAGC GCATGCCCTA CGACGTCGAG GCCGCGAAGA AGCTGCTGGC CGAGGCCGGC TATGCCGACG GTTTCGAGGT GGACTTCGCC TGTCCCAACA ATCGCTACAT CAACGACGAG GCCATCTGCC AGGCGGTCAC CGCCATGTGG GCGCGCATCG GTGTGAAGGC CAAGCTGCGC ACGCTGCCGC TGGTGACCTA CTTTCCCATG ATCCAGCGCA GCGAAGCCAG CATCTACATG CTGGGTTGGG GCGTGCCGAC CTTTGACGCG CTGTACAGCC TGCAATCGCT GGTGCGCAGC GTAGGCACTG GTGGCGATGG CAACTACAAC GTGGGCCGCT ACCGCAATGA GCGCATGGAC TACCTGGTGG ACCGCATCAA GGCCGAGACG GACGCTCCGG TGCGCGCGCG CATGCTGACC GAGGCGCTGC AGCTCTCCAA CGACACGGTC TCGCACCTGC CGCTGTACGA CCAGGTCATC CCCTGGGCCA TGAAGAAGAA TGTGGAGCTG GTGCATCGTG CCGACAACCG CATCGACATG CGCACCGTCA AGCTCCAGTG A
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Protein sequence | MRINALILSL AAACAAAVVP AAHAKTFKWA SQGEIATWDI HSQNNALQNA IHSYVYESLV YYNSRTFEVE PMLATAWREV SPTQVRFTLR QGVKFHDGSA FTADDAVYSL QRAMSKTSNY TPYVQGIDKV VKVDAQTIDI FLKSPNPVLL RQMTELRMMS KAWAEKNRSV EPKDIKGTDE NFAHRNAMGT GPYTLETWQP DVKMVFKRNP NWWGQMEGNV TEIVYTPIKS AATRIAALLS GEVDLVLDPS PQDLPRLRSS GTIKVVDGLE NRTIFLGMDQ FRDELVGSNI KGKNPLKDLR VRKALYQSID ANALTRNILR GLGKPTGTLV APQVAGWSEA VGKRMPYDVE AAKKLLAEAG YADGFEVDFA CPNNRYINDE AICQAVTAMW ARIGVKAKLR TLPLVTYFPM IQRSEASIYM LGWGVPTFDA LYSLQSLVRS VGTGGDGNYN VGRYRNERMD YLVDRIKAET DAPVRARMLT EALQLSNDTV SHLPLYDQVI PWAMKKNVEL VHRADNRIDM RTVKLQ
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