Gene Dtpsy_0661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_0661 
Symbol 
ID7384166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp683837 
End bp684925 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content58% 
IMG OID643653972 
Productporin Gram-negative type 
Protein accessionYP_002552141 
Protein GI222109877 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0957089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT CCCTGATTGC ACTGGCAGTG CTGGCTGCTT CCGGCGCCGC AATGGCCCAA 
TCCTCCGTGA CGCTGTTCGG TGTTGTTGAC ACCGCTTTCG GCTACGTGGA CAACGCTAAC
GCCGCTGGCG ACAGCGTGTA TGGCCTGAGC ACCAGCGGCA ACGCAACGAG CCGTCTGGGC
TTCCGCGGCG TGGAAGACCT GGGTGGCGGT CTGAAGGCTG GCTTCTGGCT GGAAGGCGAA
ATCTTCGGTG ACAACGGCAA CGCAGCTGGC TTCAACTTCC AGCGCCGTTC CACGGTCAGC
CTGGCTGGTG GTTTCGGTGA AGTGCGCCTG GGCCGTGACT ATACCCCTGG CTACACCAAG
TTCATCTCGT ACGACGTCTT CGGCCAGGTT GGCATTGGCC AATTCATGGG CTGGAGCAAC
TGGAATGGCA ACAACCAAAC CACGGCTAAC AACAACAACG ATGCCAACGG CATCCGTTCG
AGCAACCTGA TCAGCTACTT CACCCCTAAC TTCAGCGGCT TCACTGCCGG TCTTGGTTAT
GGCTTCGACG AAAAGGCTGA CAAGACGAAC TCGAAGAAGG GTCGTTACGT TGGTGGTTAT
GTTGCCTATG ACAACGGCCC TTTGAGTGTT GCCCTGTCTT ATGACGAGAG CAGCGCCCTG
ACCCTGGGCT CCGGTGCTAC TGCCGTCAAT GGTGCTGACC GCAATCGTCT GACCTTGGGC
GGTTCGTACA ACCTGAACGT TGTCAAGCTG AACGCCATCC TGCAGCAGAC CAAGGATGAT
GTCCCTGGCG GTTCCGAGCG CAAGGTTAAC GCCTACATGT TGGGCGCATC CGCTCCTGTG
GGCGCTGGCG AAGTCAAGGC CCAGTACGCT CTGTACGACC AGAAGTTCAT CGACTCCAAG
GCTCACCAGA TCAGCCTGGG TTATGTCCAC AACCTGTCCA AGCGTACGGC TCTGTACGGC
ACCGTGGCTT ACCTGAAGAA CAAGGACGCT TCCAACCTGG GTCTGAATGC CAAGAACCTG
AGCACCGGCG GCCCCGGCGC TGGCGAGAAC CAGACTGGCG TGCAACTGGG TATTCGCCAC
TCCTTCTAA
 
Protein sequence
MKKSLIALAV LAASGAAMAQ SSVTLFGVVD TAFGYVDNAN AAGDSVYGLS TSGNATSRLG 
FRGVEDLGGG LKAGFWLEGE IFGDNGNAAG FNFQRRSTVS LAGGFGEVRL GRDYTPGYTK
FISYDVFGQV GIGQFMGWSN WNGNNQTTAN NNNDANGIRS SNLISYFTPN FSGFTAGLGY
GFDEKADKTN SKKGRYVGGY VAYDNGPLSV ALSYDESSAL TLGSGATAVN GADRNRLTLG
GSYNLNVVKL NAILQQTKDD VPGGSERKVN AYMLGASAPV GAGEVKAQYA LYDQKFIDSK
AHQISLGYVH NLSKRTALYG TVAYLKNKDA SNLGLNAKNL STGGPGAGEN QTGVQLGIRH
SF