Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_0658 |
Symbol | |
ID | 7384163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 680557 |
End bp | 682119 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643653969 |
Product | threonine dehydratase |
Protein accession | YP_002552138 |
Protein GI | 222109874 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0435798 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAGC CTCTCACCCC GTTCGATTAC CTGACAAAGA TCCTCACCGC GCGTGTCTAT GACGTGGCGG TGGAGTCCGA CCTGCAGCCC GCCCGCGCCC TGTCGCGGCG GCTGCACAAC AAGGTGCTGC TCAAGCGCGA GGACCAGCAG CCCGTCTTCA GCTTCAAGCT GCGCGGCGCC TACAACAAGA TGGCGCAGCT TTCGCCCGAG CAGCTGGCGC GCGGCGTGAT CTGCGCCTCG GCCGGCAACC ACGCGCAGGG CGTGGCGATG AGCGCCAGCA AGCTGGGCAC GCGCGCCGTG ATCGTGATGC CCACCACCAC GCCGCAGCTC AAGATCGATG CGGTGAAGAC GCTGGGCGGC GAAGTGGTGC TGAGCGGCGA GAGCTATTCC GACGCCTACG AGCACGCCGC GCAGCTGCAA AAGGAAGAAG GCCTGACCTT CGTGCACCCC TTCGACGACC CGGACGTGAT CGCCGGCCAG GGCACGATCG CCATGGAGAT CCTGCGGCAG GTGCAGCAGC TGGGCGGCAA GCTGGATGCC GTGTTCGTCG CCATCGGCGG GGGGGGGCTG ATCGCTGGCG TGTCCAACTA CATCAAGGCC GTGTGCCCTG GCATCAAGGT CATCGGCGTG CAGATGAACG ACTCGGACGC CATGGCGCAA TCGGTCAAGG CGCATCAGCG CGTCACGCTG CCGGACGTGG GCCTGTTCTC CGACGGCACG GCCGTGAAAC TGGTGGGCGA GGAAACCTTC CGCGTCGCGC AAAACCTGGT GGACGACTAC GTGATCGTCG ACACCGATGC CGTCTGCGCT GCGATCAAGG ACATCTTCGT GGACACACGC AGCATCGTGG AGCCTGCGGG CGCCCTGGCC GTGGCCGCCA TCAAGCAGTA CGTGGCCAAG CACAAGACCA AGGGCGAAAC CTACGCCGCC ATCCTGTGCG GCGCCAACAT GAACTTCGAC CGGCTGCGCT TCGTGGCCGA GCGCGCCGAG GTGGGCGAGG AACGCGAAGC CCTGTTCGCC GTCACCATCC CCGAGGAGCG CGGCAGCTTC AAGCGCTTTT GCGAGGTGGT GGGGGCCCTG CCCGGCGGAC CGCGCAACGT GACCGAGTTC AACTACCGCA TCAGCCACGA GCGGCGCGCC CATGTGTTTG TGGGCCTGTC CACCACGGGC CGCGGCGAGT CCGAGAAGAT CGCGCGCAAC TTCCACAAGC ATGGCTTCGA GGCGCTGGAC CTCACGCACG ACGAGCTGGC CAAGGAGCAC CTGCGCCACC TCGTCGGCGG CCATTCGGCG CTGGCGCGCG ACGAGCGGCT GATGCGCTTC ACCTTCCCCG AGCGCCCCGG CGCGCTGTTC AAGTTCCTGA GCCTGATGCA GCCCACCTGG AACATCTCGC TGTTCCACTA CCGCAACCAG GGCGCGGACT ATGGGCGCAT CCTCGTGGGC ATGCAGGTGC CGGCCGACGA CGCAGCGCAG TTCGATGCCT TCCTGCAGAC GCTGGGCTAC CCCTATGTCG AGGAAACGCA GAACCCGGCC TACCGCCTGT TCCTGCAGGC CAACGGCGCA TGA
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Protein sequence | MTQPLTPFDY LTKILTARVY DVAVESDLQP ARALSRRLHN KVLLKREDQQ PVFSFKLRGA YNKMAQLSPE QLARGVICAS AGNHAQGVAM SASKLGTRAV IVMPTTTPQL KIDAVKTLGG EVVLSGESYS DAYEHAAQLQ KEEGLTFVHP FDDPDVIAGQ GTIAMEILRQ VQQLGGKLDA VFVAIGGGGL IAGVSNYIKA VCPGIKVIGV QMNDSDAMAQ SVKAHQRVTL PDVGLFSDGT AVKLVGEETF RVAQNLVDDY VIVDTDAVCA AIKDIFVDTR SIVEPAGALA VAAIKQYVAK HKTKGETYAA ILCGANMNFD RLRFVAERAE VGEEREALFA VTIPEERGSF KRFCEVVGAL PGGPRNVTEF NYRISHERRA HVFVGLSTTG RGESEKIARN FHKHGFEALD LTHDELAKEH LRHLVGGHSA LARDERLMRF TFPERPGALF KFLSLMQPTW NISLFHYRNQ GADYGRILVG MQVPADDAAQ FDAFLQTLGY PYVEETQNPA YRLFLQANGA
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